You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Connecting Viral Pandemics to Ecological Population Growth Models
    In this activity students use the HHMI Population Growth Models interactive to explore R0 for diseases and discuss the importance of connecting population ecology to current events like the...
    1789

    views

    793

    downloads

    0

    comments

    0

    adaptations

    Evidence of Evolution Homologous Structures
    Using CT (Computed Tomography) scans of vertebrate forelimbs, both as 3D models and as shapefiles, to enhance and illustrate the concepts of homologous structures, and the evolution of anatomical...

    Keywords: EvolutionidigbioZoology3D modelsanatomy and physiologyMiddle SchoolVertebrate MorphologyCT scanoVerthomologous structures

    1325

    views

    653

    downloads

    0

    comments

    0

    adaptations

    SEIR simulation activity for flattening the curve
    This is a short exploration activity to introduce SIR and SEIR models without explicitly introducing differential equations. It utilizes the R package EpiDynamics and students can run the...

    Keywords: RRStudioInfectious Disease ModelingSIR modelsSIRseircovidcoronavirus

    2177

    views

    603

    downloads

    0

    comments

    0

    adaptations

    A “Rule-of-Five” Framework for Models and Modeling
    In this paper, we extend the “Rule-of-Four,” initially used in calculus reform efforts, to a “Rule-of-Five” framework for models and modeling that is inclusive of varying disciplinary definitions...
    821

    views

    166

    downloads

    0

    comments

    0

    adaptations

    Circle Train Math Modeling Task
    This math modeling task is appropriate for high school Precalculus students. The students use their knowledge of transformations of trigonometric functions to create models for horizontal and...

    Keywords: mathematical modelTrigonometric Functionsparametric equationstransformations of functions

    995

    views

    338

    downloads

    0

    comments

    0

    adaptations

    2013-Clarke-Skirba-Rationale and resources for teaching the mathematical modeling of athletic training and performance
    It is advisable that the professionals involved learn the various tools available for designing effective training programs.

    Keywords: fitnessexercise physiologycritical power modelBanister impulse-response modelcoaching educationphysical fitnessperformance modeling

    125

    views

    31

    downloads

    0

    comments

    0

    adaptations

    2007-Exben_Friis-Jensen-Modeling and Simulation of Glucose-Insulin Metabolism
    In this thesis one of the models of diabetes, Bergman’s minimal model is described trough derivation and simulations.

    Keywords: Metabolisminsulin resistanceglucosePID controllerintolerance

    100

    views

    44

    downloads

    0

    comments

    0

    adaptations

    2015-H_Sayama-Intro to Modeling and Analysis of Complex Systems
    Introduces students to mathematical/computational modeling and analysis developed in the emerging interdisciplinary field of Complex Systems Science.

    Keywords: textbooktext

    111

    views

    44

    downloads

    0

    comments

    0

    adaptations

    9-014-TurkeyCook-ModelingScenario
    The goal of this project is to investigate several models for the cooking time for a turkey based on weight, test these models with data obtained from heating curves for turkeys of various weights,...

    Keywords: sphereheat equationturkeyPanofskyradial symmetry

    724

    views

    1892

    downloads

    0

    comments

    0

    adaptations

    3-043-BallisticModeling-SpongeDart-ModelingScenario
    The goal of this project is for students to develop, analyze, and compare three different models for the flight of a sponge dart moving under the influences of gravity and air resistance.

    Keywords: projectile motionair resistanceballisticsdimensional analysisNewtonian mechanicssponge dartNerf gunNerf dartBuckingham's Theorem

    580

    views

    603

    downloads

    0

    comments

    0

    adaptations

    An introduction to population matrix models: a swirl lesson
    Students will learn how to set up a population matrix model in R and use it for demographic analysis of a population, including projecting population growth, determining lambda and the stable age...

    Keywords: population dynamicsRpopulation growthonlinedemographypopulation projection modelquantitative biologypopulation modelmatrix modelspopulation ecologyage structurepopulation biologypopulation modelingSwirlDemographic processespopulationLeslie matrix

    2346

    views

    6037

    downloads

    0

    comments

    0

    adaptations

    The ODD protocol: A review and first update
    The ‘ODD’ (Overview, Design concepts, and Details) protocol was published in 2006 to standardize the published descriptions of individual-based and agent-based models (ABMs).

    Keywords: agent-based modelabmstandardizationODD protocolModel descriptionModel formulationScientific communicationChapter 3model replic

    970

    views

    509

    downloads

    0

    comments

    0

    adaptations

    It's a Substrate... It's a Protein...No - It's an Enzyme! Teaching Using 3D Serine Protease Physical Modeling Activities to Confront Misconceptions.
    Reported misconceptions of enzyme-substrate interactions highlight the necessity for better, targeted instructional tools and assessments. A series of active learning activities with corresponding...

    Keywords: Protein StructureEnzymes-Substrate InteractionsNoncovalent InteractionsGeometric ComplementaryElectronicsStereochemistrySerine Proteases

    2869

    views

    373

    downloads

    0

    comments

    0

    adaptations

    2007-Bellomo-De_Angelis-Delitala-Lecture Notes on Mathematical Modelling in Applied Sciences
    The Lectures Notes correspond to the first part of the course devoted to modelling issues to show how the application of models to describe real world phenomena generates mathematical problems to...

    Keywords: spring massLegendre polynomialsintegro-differential equationskinetic theory

    93

    views

    38

    downloads

    0

    comments

    0

    adaptations

    2006-Cooke-Elderkin-Huang-Predator-Prey interactions with delays due to juvenile maturation
    This paper focuses on predator-prey models with juvenile/mature class structure for each of the predator and prey populations in turn, further classified by whether juvenile or mature individuals...

    Keywords: predator-preyhost-parasitebifurcationage structrematuration delay

    120

    views

    34

    downloads

    0

    comments

    0

    adaptations

    Moths and Frogs and E. coli, Oh My!: Agent-based Modeling of Evolutionary Systems
    In evolution classrooms, introducing and reinforcing the idea of genetic drift and random selection can be challenging, as can be reinforcing appropriate mental models of evolution. Agent-based...

    Keywords: modelingEvolutionecologyagent-based modelingGenetic Driftenvironmental scienceNatural Selectioncompetitive coevolutionsimulation modelingevolutionary reasoning

    2938

    views

    433

    downloads

    0

    comments

    0

    adaptations

    2012-Brian_Ingalls-Mathematical Modelling in Systems Biology An Introduction
    This is a comprehensive text with much biology background to motivate the mathematical modeling, exercises and answers, and many rich examples.

    Keywords: spatialsensitivity analysisgene regulatory networksstochasticbifurcationmetabolic networkselectrophysiologytransductionrate lawsbiochemical reactions

    383

    views

    82

    downloads

    0

    comments

    0

    adaptations

    RAT ATTACK! Population growth
    This module contains exercises focused on the use and interpretation of density independent and density dependent population growth models. Students build logistic and exponential growth models in...

    Keywords: modelingecologyExcelintroductory biologygraphingQuantitative reasoningdata visualizationinterdisciplinaryexponential growthlogistic growthdata managementInterpreting Graphspopulation modelingNIQBC2. Data and GraphsC4. mathematical modelsnonlinear models

    587

    views

    629

    downloads

    0

    comments

    0

    adaptations

    2016-Rob_deBoer-Population Dynamics  A Graphical Approach
    This book is an introduction into modeling population dynamics in ecology. Because there are several good textbooks on this subject, the book needs a novel ecological niche to justify its existence.

    Keywords: mathematical modelstabilitycompetitionSIRbifurcationconsumptionpopulation population dynamicsgeneral replicationnonlinear density dependenciesfunctional responsepersistencephase plan analysis

    170

    views

    56

    downloads

    0

    comments

    0

    adaptations

    An Introduction to agent-based modeling.
    Introductory level textbook based on a collection of lecture notes from an undergraduate course on agent-based modeling at Arizona State University.

    Keywords: textbookcurriculumNetLogoagent-based modelingIndividual & Agent Based Modelingcourseundergraduate educationResources @ QUBES - Teaching & Reference

    2047

    views

    240

    downloads

    1

    comments

    0

    adaptations

    Close

    Home

    Search