You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Are you learning R? Suggestions to help you as you learn.
    Learning how to code and analyze data in R is an important skill. Olivia Tabares and the Ecological Forecasting Education Working Group created this resource to encourage individuals who are...

    Keywords: R code

    575

    views

    126

    downloads

    0

    comments

    0

    adaptations

    BioQUEST Partner Support Module: Exploring Community
    A four-week module for BioQUEST's Research Coordination Network partners on using BioQUEST's features, resources, and services to build a community that supports their project goals.

    Keywords: Resources @ BioQUESTRCNcommunitybuilding communityOnline community building

    632

    views

    417

    downloads

    0

    comments

    0

    adaptations

    Revising Social & Environmental Justice Open Educational Resources through UDL and Accessibility Lenses
    The Revising Social & Environmental Justice Open Educational Resources through UDL and Accessibility Lenses Working Group met during the Fall 2021 semester as part of the BIOME Institute. This...

    Keywords: social justiceenvironmental justiceBiome Institute2021 BIOME

    1103

    views

    702

    downloads

    0

    comments

    0

    adaptations

    Lichens in Your Local Landscape
    This project uses Lichens to connect students with their local environmental air quality. Through a short lab session, students assess lichens growing on trees on their campus. They then use class...

    Keywords: NEONNational Ecological Observatory Network

    768

    views

    368

    downloads

    0

    comments

    0

    adaptations

    The Ames Test
    Introduction to the Ames Test, published as GSA Learning Resource

    Keywords: geneticsNIBLSEDNAames testassay

    1428

    views

    233

    downloads

    0

    comments

    0

    adaptations

    An Adaptation of "Lichens in Diverse Landscapes" for BIO 3400 Ecology at Greensboro College
    This resource includes a lichen data analysis lab that I adapted for students in BIO 3400 Ecology, an upper level in person course at Greensboro College that met during the Fall 2020 semester.

    Keywords: NEONNational Ecological Observatory Network

    878

    views

    651

    downloads

    0

    comments

    0

    adaptations

    Module 4: Removal of Introns from pre-mRNA by Splicing
    In this module, students will learn to identify splice donor and acceptor sites that are best supported by RNA-Seq data, and use the canonical splice donor and splice acceptor sequences to identify...

    Keywords: geneticsdata visualizationmolecular biologygenomicsexonintronsplicingSimilarity searchesRNA Maturation

    1087

    views

    3227

    downloads

    0

    comments

    0

    adaptations

    How does increasing atmospheric carbon dioxide disrupt ecological systems? Results from FACE experiments across the globe.
    This module synthesizes key findings from forested CO2 enrichment experiments over the last 3 decades. Students should have a basic working knowledge of climate change, ecosystem nutrient cycles...
    1526

    views

    659

    downloads

    0

    comments

    0

    adaptations

    SEIR simulation activity for flattening the curve
    This is a short exploration activity to introduce SIR and SEIR models without explicitly introducing differential equations. It utilizes the R package EpiDynamics and students can run the...

    Keywords: RRStudioInfectious Disease ModelingSIR modelsSIRseircovidcoronavirus

    2145

    views

    589

    downloads

    0

    comments

    0

    adaptations

    Introduction to UNIX command line
    A laboratory module for an upper-level undergraduate biology course in which students will be able to carry out simple tasks using the Unix command-line environment.

    Keywords: NIBLSEcommand lineUNIXsequence analysis

    1456

    views

    641

    downloads

    0

    comments

    0

    adaptations

    Conference-based Undergraduate Experiences: Lowering the Barrier for Learning about Computational Biology
    Presentation on how attending conferences can enhance computational biology training for undergraduates at the 2019 Great Lakes Bioinformatics Conference

    Keywords: undergraduate educationcomputational biologyBioinformatcs

    1248

    views

    280

    downloads

    0

    comments

    0

    adaptations

    Mutation and Equilibrium Worksheet
    This is a worksheet created for students to complete when doing the Mutation and Equilibrium MathBench activity.
    909

    views

    289

    downloads

    0

    comments

    0

    adaptations

    Investigating human impacts on stream ecology: locally and nationally
    How does nutrient pollution impact stream ecosystems locally and nationally?
    1155

    views

    1251

    downloads

    0

    comments

    0

    adaptations

    Intro to BIOMAAP - Student Introduction - Teaching Notes
    I used this resource as-is. Included are my teaching notes.

    Keywords: metacognitionmath attitudesResources @ BIOMAAP

    960

    views

    253

    downloads

    0

    comments

    0

    adaptations

    Investigating human impacts on stream ecology: Intro to R
    This resource uses the Human Impact on Stream Ecology data set, background and questions and provides students an very general introduction to using R. Students perform basic summary statistics and...

    Keywords: graphingdata visualizationR programming languagedescriptive statisticsundergraduate environmental science

    1438

    views

    1001

    downloads

    0

    comments

    0

    adaptations

    Species Range Over Space and Time
    In this module, students use data from natural history collections to look at range shifts related to climate variables over different time periods.

    Keywords: data in the classroomdigital resourcesclimate changenatural history collection

    3377

    views

    1390

    downloads

    0

    comments

    0

    adaptations

    A Structured Inquiry Approach to Cotyledon Phenotyping
    In this lab, students will work with messy data to try to answer the question “How do plants inherit cotyledon color?”

    Keywords: geneticsplantsphenotypecotelydon

    1071

    views

    546

    downloads

    0

    comments

    0

    adaptations

    Salamander Mark-Recapture using SPARCnet plots with the Schnabel Method
    A salamander mark-recapture module where students field collect a third survey occasion to estimate population size

    Keywords: Field researchsalamanderCapture mark-recaptureAudience level - Advanced UG

    1781

    views

    1588

    downloads

    0

    comments

    0

    adaptations

    Using Online Materials/Videos to Enrich Linear Algebra for Scientists
    Abstract for a talk given on an experiment using MIT’s open courseware linear algebra videos to teach a linear algebra course without prerequisites that targeted biology majors.

    Keywords: videoslinear algebraopen coursewareCamtasia

    1108

    views

    164

    downloads

    0

    comments

    0

    adaptations

    RNA-seq Analysis
    In this computer lab module, students learn how to process an RNA-seq data set to identify differentially expressed genes (DEGs). The samples for this data set were collected from yeast cells...

    Keywords: LabRNAsequencingUndergraduateNIBLSEincubatorsRNAseqInstructional SettingAudience LevelActivity LengthMore than 1 hourC4. Bioinformatics toolsC5. Data retrievalReviewed at NIBLSEdifferentially expressed genes

    1593

    views

    288

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search