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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Genome Solver: Building faculty skills in bioinformatics
    Genome Solver (GS) began in 2011 as an NSF-funded project for faculty training in basic web-based bioinformatics skills.

    Keywords: faculty developmentbioinformaticsgenome solver

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    4

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    My Twin Sister Case Study
    A young boy wonders why his twin sister can roll his tongue, but he cannot. Case centers on meiosis.

    Keywords: case studymeiosistwins

    946

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    345

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    One-way ANOVA in R with swirl
    One-way analysis of variance (ANOVA), following the text in Chapter 5 of Beckerman et al. (2017) Getting started with R: an introduction for biologists, 2nd edition.

    Keywords: R programming languageANOVAggplot2Swirl

    1139

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    Bacteria Transformation
    TeachEngineering resource in which students construct paper recombinant plasmids to simulate the methods genetic engineers use to create modified bacteria.

    Keywords: bacteriaengineeringGMOsbacterial transformationplasmids

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    Building creatures with the central dogma of biology
    Activity that demonstrates how nucleotide changes can affect phenotypes

    Keywords: amino acidsnucleotidesRNADNAgenotypephenotypecentral dogma

    1207

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    Teaching Population Dynamics with Data and HHMI BioInteractive
    Presented at NABT 2019, we demonstrate how the Population Dynamics Click & Learn resource can be customized for any organism - using the Lionfish invasion as an example

    Keywords: population growthHHMI BioInteractive

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    Successful Strategies for Promoting Change in Undergraduate Biology Departments
    Poster on PULSE workshops presented at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: professional development2019 QUBES/BioQUEST Summer WorkshopPULSE

    1026

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    238

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    Targeting Infected Cells for Immune Defense
    This animation shows how a cell infected by a virus signals cytotoxic T cells to destroy itself.

    Keywords: Resources @ HHMI - BioInteractiveimmune systemAnatomy & PhysiologyCell communication

    996

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    181

    downloads

    0

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    The Biology of Skin Color
    This film explores the hypothesis that different tones of skin color in humans arose as adaptations to the intensity of ultraviolet radiation in different parts of the world.

    Keywords: Resources @ HHMI - BioInteractivegene regulationgene expressionAnatomy & Physiologyhuman evolutionfilm

    3600

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    Population Genetics: Limits to Adaptation
    This module introduces gene flow in the context of understanding the persistence of maladaptive traits in some populations. It is intended for an introductory biology audience.

    Keywords: LogarithmsAlgebraGenetics and Evolution

    810

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    183

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    0

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    Species-Area Relationships
    This module introduces species-area curves in the context of understanding spatial diversity patterns. It is intended for an introductory biology audience.

    Keywords: ecologyexponential equationsOpenStaxlogarithmic equations

    884

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    180

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    0

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    Type II Functional Response: Holling’s Disk Equation
    This module introduces the Holling’s disk equation in the context of understanding the relationship between an individual's rate of consumption and food density. It is intended for an introductory...

    Keywords: ecologyHolling's Disk Equation

    877

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    159

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    Cohort Life Tables
    This module introduces cohort life tables in the context of understanding demographic processes and how they affect populations. It is intended for an introductory biology audience.

    Keywords: population dynamicsecologyOpenStaxfuncitonsDemographic processes

    1038

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    Exploration of the Human Genome by Investigation of Personalized SNPs
    To increase students' interest in their own genomes, this computer-based laboratory lesson is designed to be coupled with the opportunity for the students to be genotyped by the consumer sequencing...

    Keywords: bioinformaticsNIBLSECourseSourcegenomic wide association studiesUCSC genome browsersingle nucleotide polymorphism

    1293

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    330

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    Regulation Across Scales: Data Points on How Life Works
    We examined the scientific literature for simple, data-based illustrations of double-negative logic in the regulation of biological systems as described by Sean B. Carroll in his text, The...
    758

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    232

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    More Mice with Fangs: Intermediate Punnett Squares
    An online module utilizing probability and Punnett squares to introduce students to more complex genetic problems. The module emphasizes students' use of probability to solve the problems.

    Keywords: geneticsProbabilityResources @ MathBenchonlinepunnett squares

    1090

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    164

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    Using DNA Subway to Analyze Sequence Relationships
    This is a bioinformatics exercise using the DNA Subway Blue Line, a user-friendly pipeline of bioinformatics tools, to analyze a collection of mosquito DNA bar-code sequences.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignmentC1. Role of bioinformaticsC2. Computational conceptsC4. Bioinformatics toolsC5. Data retrievalC8. Data typesIncubated at NIBLSE

    2953

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    556

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    2

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    Monkey Opsins
    This case will examine the evolution of trichromatic vision in old world monkeys.

    Keywords: modulephylogeneticsecologycell biologymolecular geneticsResources @ EvoEd

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    243

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    Exploring the population dynamics of wintering bald eagles through long-term data
    This is an FMN participant modification of the TIEE module "Exploring the population dynamics of wintering bald eagles through long-term data" authored by Julie Beckstead, Alexandra N....

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

    1756

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    262

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    Wolf Sheep Predation Simulation Exercise
    This resource is an exercise to introduce students to agent-based modeling of biological systems through working with a simple existing model.

    Keywords: simulationecologyIntroductoryNetLogoagent-based modelingagent-based modelLabbioinformaticspredator-preyUndergraduateNIBLSEInstructional SettingAudience LevelActivity LengthLess than 1 hoursimulation cycleC1. Role of bioinformaticsC6. ModelsReviewed at NIBLSEagent based modleing

    2704

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    494

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