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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Lesson II - Databases
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson II introduces the principal databases for microbial...

    Keywords: Bioinformatics EducationBioinformatics and Genomics

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    Data management and introduction to QGIS and RStudio for spatial analysis
    Students learn about the importance of good data management and begin to explore QGIS and RStudio for spatial analysis purposes. Students will explore National Land Cover Database raster data and...

    Keywords: tool:rstudioGISdata managementlandscape ecologyGeospatial ScienceNational Ecological Observatory Networkquantitative inquiryQGIS

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    GBIF Tutorial - BLUE Resource
    A user guide and video instructions for GBIF

    Keywords: Querying databasesdatabasedata in the classroombiodiversity informaticsbiodiversity collections

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    A flexible, multi-week approach to plant biology - How will plants respond to higher levels of CO2?
    To help introductory biology students understand how plants will respond to higher levels of CO2, we have created a multi-week module consisting of a series of four related laboratory lessons....

    Keywords: statisticsplantsphotosynthesiscarbon dioxidecommunicating sciencegroup workResource AllocationRespirationStomata

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    A CURE-based approach to teaching genomics using mitochondrial genomes
    There is an abundance (currently over 1016 DNA bases) of publicly available genetic sequence data and a dearth of trained genomicists to process and interpret it, necessitating more trained...

    Keywords: proteinsMitochondrial GenomesNuclear GenomesrRNAtRNA

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    2015-Boggess-EtAl-Mathematical Modeling in Ecology - Simulating the Reintroduction of the Extinct Passenger Pigeon
    To determine under which conditions a Passenger Pigeon could survive a reintroduction into a natural habitat, we used two types of models.

    Keywords: simulationagent-based modelingallee_effectPassenger Pigeonsforest envirnomentHolling Type III functional responseBio-energeticstree distributions

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    2011-Teleken-EtAl-Mathematical modeling of microbial growth in milk
    A mathematical model to predict microbial growth in milk was developed and analyzed. The model consists of a system of two differential equations of first order. The equations are based on physical...

    Keywords: bacteriadairymilkfood safetymicrobilogy

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    1-104-InfectionRisk-ModelingScenario
    This project is designed to examine differences between the exponential and logistic growth models in biology and how to apply these models in solving epidemic questions.

    Keywords: infectionlogisticexponentialcovidcarrying capacity

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    Implementing Flexible Learning Projects to support authentic research experiences in Ecology (BIO 3317) at McDaniel College
    This adaptation highlights the utility of the Lichens in YOUR Local Landscape module for teaching field skills, quantitative analysis across scales, and for writing research papers.

    Keywords: NEONNational Ecological Observatory Network

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    QB@CC Poster for NABT 2020
    This is a poster presentation at the 2020 NABT Annual PD Conference. This poster describes the goals of QB@CC project, progress in the first year and an update on the upcoming events.

    Keywords: quant bioQuantitative reasoningcommunity collegesquantitative biologyquantitative skillsincubatorsqbccBiology and Math CollaborationOERsNABT 2020NSF grantRCN UBE grantQB learning modules

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    Building Community-Based Approaches to Systemic Reform in Mathematical Biology Education
    This is an open access article from Bulletins in Math Bio.
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    Introductory Science and Mathematics Education for 21st-Century Biologists
    A unified introductory science curriculum that fully incorporates mathematics and quantitative thinking aimed to incorporate biology into the traditional quantitative cultures that have come to...

    Keywords: mathematicsquantitativemathQuantitative reasoningquantitative biologymathsintro mathintroductory mathintroductory mathematicsquantmath for biomath for biologymath forResources @ QUBES - Teaching & Reference

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    Bio+: Integration of Biology Principles and Application in Cross-Disciplinary Curricula
    Poster on two cross-disciplinary courses at Olin College presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: cross-disciplinary instructionSummer Workshop 2018

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    AIMS- Analyzing Images to learn Mathematics and Statistics - studying leaf cutter ants to learn linear regression
    This is a teaching resource that uses fascinating images and videos of leaf cutter ants foraging in Panama to provide an engaging context for students to learn about mathematics and statistics.

    Keywords: statisticsmoduleecologydata analysisleaf cutter antsmorphologyforagingallometryeusociallinear regressionimage analysisin-class activitylab protocolproject

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    Calculus, Zombies, Community, and QUBES
    Presentation discussing approaches to determining the content and delivery structure for quantitative integration into the curriculum of foundational courses in both statistics and calculus for the...

    Keywords: math bio edzombiesmath confidenceumaine

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    Observing the Birds of El Paso: Revisiting historical localities online and in the field
    In this set of activities, students are introduced to several features and use cases of museum databases to understand the importance of historical natural history specimens and their data. Using...

    Keywords: databaseBiodiversityOrnithologynatural history museumsspecies distributionsdistance learningField Experiences

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    Choosing healthy data for healthy relationships: how to use 5-point summaries, box and whisker plots, and correlation to understand global health trends.
    This module utilizes a user-friendly database exploring data selection, box-and-whisker plot, and correlation analysis. It also guides students on how to make a poster of their data and conclusions.

    Keywords: Querying databasesgraphingRatiosdata typesstatistical learningcorrelationBox Plotsqbcchealth sciences education researchnutrition & food scienceUnderstanding ratesCreate graphsInterpret graphsinterpret tablesHealth ScienceConcepts in Statisticsexplaining statisticsusing statistics

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    Parasites -- They're what's for dinner: Investigating the role of parasites in aquatic food webs
    Use a well-resolved food web database from a freshwater wetland ecosystem in central California to explore how parasites influence community properties and learn how food webs are constructed and...

    Keywords: Resources @ ESA - TIEEparasitismDisease ecologyfmnDIGfood web ecologywetland communitiescomplex life cyclesnetwork modelingintroductory ecology

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    Asking and Answering Questions: ADW’s Flexible Querying Tool
    Presentation made by Tanya Dewey et al. as part of the "Bringing Research Data to the Ecology Classroom: Opportunities, Barriers, and Next Steps” Session at the Ecological Society of America...

    Keywords: Ecological Society of America

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    Downloading and Visualizing Project Data from the iNaturalist Database
    In this activity you will learn how to create a query, export, and download data from iNaturalist; load data into R; explore pollinator-plant interactions with R, and create heat map, bipartite,...

    Keywords: data visualizationplantsPlant EcologyPlant-insect interactionsnetwork#iNaturalistBLUEpollinators

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