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    Lesson III - Annotation
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all...
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    Metabolism for Energy and the Respiratory Quotient
    This module introduces the respiratory quotient in the context of understanding how metabolism is affected by environmental conditions. It is intended for an introductory biology audience.
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    BIO 263 Ecological Data Analysis
    Course materials for BIO 263 Ecological Data Analysis

    Keywords: Rdata analysisecological datasets

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    Confronting the challenges of bringing research data into undergraduate classrooms using online faculty mentoring networks
    Poster on using ecological research data in undergraduate courses

    Keywords: Ecological Society of Americafmn

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    Fitting Exponential and Logistic Growth Models to Bacterial Cell Count Data
    In this activity, students will model a noisy set of bacterial cell count data using both exponential and logistic growth models. For each model the students will plot the data (or a linear...

    Keywords: modelingdata analysislinear regressiongraphingExponentsoptimizationcalculusInterpreting GraphsFunctionsqbccCellular and Molecular BiologyChoosing modelsUnderstanding ratesConcepts in Statisticsmeasurementsmanipulating equationscreating graphsExponential and Logarithmic Functionsinterpreting tables

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    1994-Paul_Davis-Asking Good Questions about Differential Equations
    A general essay about the Rule of Three – numerical, algebraic, and graphical perspectives + modeling with one illustration about Irish population.

    Keywords: questionspopulationnumericalphysical contextgraphicalalgebraicIreland

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    Putting specimens on the map: An introduction to georeferencing
    Use GEOLocate to assign geographic coordinates to natural history collections specimens

    Keywords: mappingnatural history collectionscourse-based research experiences (CUREs)digitized natural history collectionsgeoreferencing

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    1-035-DotseroVolcanoEruption-ModelingScenario
    In this scenario, we use Carbon-14 dating of the Dotsero volcano in Colorado as a way of emphasizing this multistage process of modeling.

    Keywords: exponential decayhalf-lifedecayEuler's methodcarbon datingdecay rateCarbon-14Dotsero volcanovolcano

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    Islands as a Tool for Teaching Ecology and Evolution
    Module for Ecology & Evolution course covering island biogeography principles, The scientific process and hypothesis testing, statistical methods (t-tests, regression), and online database use...

    Keywords: moduleResources @ AIM-UP!species richnessBiodiversityIsland biogeographyAIM-UP

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    Introduction to Mathematical Modeling in Biotechnology, Cell Biology, and Physiology
    The course is a mathematical and computational exploration of five diverse areas of biology: human locomotion, gene sequence analysis, signal transduction pathways involved in cancer,...

    Keywords: mathematical modelingcoursehuman locomotionneuroanatomyneurophysiologysignal transductiongene sequence analysis

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    Engaging Students in Pharmacogenetics: Patient Case Studies Using the PharmGKB Website
    Cytochrome P450 (CYP) enzymes are important regulators of drug efficacy and toxicity. Genetic variation in CYP isoforms can impact how well patients respond to medications or experience unwanted...

    Keywords: toxicologyPharmacologydrug metabolismpharmacodynamicspharmacogenetics

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    6-010-SocialCampaign-ModelingScenario
    The epidemic modeling problem is formulated as a system of three nonlinear, first order differential equations in which three compartments (S, I, and R) of the population are linked.

    Keywords: diseasegrowth rateJudgment and Decision MakingSIR modelinfections diseasesocial campaignrecovery ratedelay timejoining processquitting processexponential distribution

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    A Structured Inquiry Approach to Cotyledon Phenotyping
    In this lab, students will work with messy data to try to answer the question “How do plants inherit cotyledon color?”

    Keywords: geneticsplantsphenotypecotelydon

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    A Structured Inquiry Approach to Cotyledon Phenotyping
    In this lab, students will work with messy data to try to answer the question “How do plants inherit cotyledon color?”

    Keywords: geneticsplantsphenotypecotelydon

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    2010-Brian_Winkel-Parameter estimates in differential equation models for chemical kinetics
    We discuss the need for devoting time in differential equations courses to modelling and the completion of the modelling process with efforts to estimate the parameters in the models using data.

    Keywords: kineticschemical kineticszeroth order reactionfirst order reactionsecond order reaction

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    2022 BioQUEST OneHealth Plug-and-Play CURE Model Working Group - YouTube
    For the Fall 2022 BIOME Working Group, we have developed a plug-and-play CURE model that will allow educators to pick and choose CURE resources, centered on microbial diversity and ecology, to...

    Keywords: BIOME 2022#OneHealth #Ecology #PreHealth #PreMed #PreVet #VetMed #StudentResources #SciComm #SciEd#SmallWorld #BiolLabCURE #CUREPlugandPlayCURE

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    Spreadsheet Tutorial 1: Adapted to Anatomy and Physiology
    Adapted the examples to Anatomy and Physiology relevant topics and implemented in BIO165L Anatomy and Physiology I Laboratory for non-majors.

    Keywords: Resources @ HHMI - BioInteractivesummary statisticsScientific ProcessScientific Methodology

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    Staying Alive: Extinction Risk: Introduction to Extinction and Extinction Bias
    Data driven curriculum module from Dryad Digital Repository

    Keywords: ecologydata analysisconservationgraphingResources @ Dryadextinctionmacroevolution

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    Plant-microbial mutualisms in canopy gap recovery: How do soil microbial symbionts help tropical forests recover from treefall gaps?
    This module uses tropical plant-soil microbial interactions in canopy gaps as a lens to better understand species interactions and disturbance ecology, while showing how scientists study these...

    Keywords: forest ecologyPlant Ecologynutrient cyclingmicrobestropical forestsDisturbances

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    Traditional Ecological Knowledge and Natural History
    In this module, students will explore Western Science and Traditional Ecological Knowledge and review a case study of how the TEK of the Inuit provided a way of knowing and understanding the...

    Keywords: Traditional ecological knowledgeUnderstanding ScienceBowhead Whale

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