QUBES will have scheduled maintenance work beginning on Wednesday, June 26, 2024, 4pm ET/1pm PT. The platform will operate normally for most of the day, except for an extended outage period lasting no more than 4 hours. All running tool sessions will expire during the maintenance window. Please plan accordingly and we do apologize for any inconvenience. close

You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Water We Doing: A Deep Dive Into Sustainable Ocean Management & Blue Economies
    This lesson explores the concept of blue economies and includes a detailing lesson in R that involves basic statistics and building complex graphics.

    Keywords: linear regressionRStudioblue economy

    630

    views

    377

    downloads

    0

    comments

    0

    adaptations

    Intro to DNA Subway Blue Line
    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 1 hr 50 min lecture or lab class period.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignment

    2903

    views

    196

    downloads

    0

    comments

    0

    adaptations

    2008-Taro-Blog on Modern Political Economy-Differential Equations in Our Life
    Differential equations - easy to hear but often impossible to solve- are around there in our life. If you are an econ learner, you have much time to express the economy by using differential...

    Keywords: bathtubhot coffeerunning taterexonomicsforgetting

    71

    views

    29

    downloads

    0

    comments

    0

    adaptations

    Intro to DNA Barcoding
    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 30-45 min lecture or lab class period.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignment

    1756

    views

    209

    downloads

    0

    comments

    0

    adaptations

    Happy Blue Baby: MCQs for large classes
    Multiple choice questions for the Happy Blue Baby case study pre-work

    Keywords: mutationHemoglobinmolecular visualization and analysisPDBMolecular Case Study

    800

    views

    282

    downloads

    0

    comments

    0

    adaptations

    Engaging students in data exploration using digital biodiversity databases: BLUE Data Network
    Slides for BLUE presentation at 2020 BIOME Institute: Cultivating Scientific Curiosity

    Keywords: undergraduate researchnatural historyBiodiversitynatural history collectionsbiodiversity collectionsBLUEbiodiversity literacy

    1025

    views

    261

    downloads

    0

    comments

    0

    adaptations

    Using Data Science Skills and Digitized Natural History Collections Data to Investigate Ecological and Evolutionary Principles in Introductory Biology Courses
    Session presentation Biodiversity Literacy in Undergraduate Education project at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: data sciencenatural history collections2019 QUBES/BioQUEST Summer WorkshopBLUEdigitized natural history collections

    1247

    views

    275

    downloads

    0

    comments

    0

    adaptations

    DNA Barcoding & Biodiversity databases
    This resource pairs DNA barcoding databases with Biodiversity databases. Students collect their insect specimens in the field and use BLAST and BOLD to identify their species. They then use...
    990

    views

    593

    downloads

    0

    comments

    0

    adaptations

    Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom
    Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: data sciencenatural history collections2019 QUBES/BioQUEST Summer WorkshopBLUE

    1164

    views

    121

    downloads

    0

    comments

    0

    adaptations

    The career of a shark researcher with Dr. Chris Lowe
    From blue-collar to deep blue research, professor of marine biology and director of the Shark Lab at California State University discusses his life journey and his fascinating research of sharks,...

    Keywords: marine biologyCareer Exploration

    423

    views

    109

    downloads

    0

    comments

    0

    adaptations

    Natural history collections data and Biodiversity Literacy in Undergraduate Education (BLUE)
    Presentation made by Elizabeth Ellwood et al. as part of the "Bringing Research Data to the Ecology Classroom: Opportunities, Barriers, and Next Steps” Session at the Ecological Society of...

    Keywords: Ecological Society of America

    1323

    views

    385

    downloads

    0

    comments

    0

    adaptations

    6-025-WhalesAndKrill-ModelingScenario
    Students will use Excel to observe qualitative behavior in a simulation of a predator-prey model, with blue whales and krill as the predator and prey populations, respectively.

    Keywords: krillwhalepredatpr-prey

    288

    views

    1143

    downloads

    0

    comments

    0

    adaptations

    Happy Blue Baby
    This case, about a specific mutant of hemoglobin, focuses on visualizing and understanding the molecular basis of why an infant turned blue soon after birth and how the cyanosis resolved on its own...

    Keywords: mutationHemoglobinmolecular visualization and analysisPDBMolecular Case Study

    1416

    views

    523

    downloads

    0

    comments

    3

    adaptations

    Java BankAccount demo, using Blue J, v2
    CPSC1100 UTC, Spring 2017. Exercises are modified from Big JAVA.

    Keywords: videosjavagenomicsyoutube

    1151

    views

    300

    downloads

    0

    comments

    0

    adaptations

    Using Natural History Collection Data in Your CURE: BLUE BIOME 2020
    This is the report for the BLUE working group from the Biome Institute 2020. It reflects our group's efforts and products related to CUREs and Natural History Collection Digital Data.

    Keywords: digitized natural history collectionsBIOME 2020Biodiversity Literacy in Undergraduate Education

    996

    views

    272

    downloads

    0

    comments

    0

    adaptations

    Integrating digitized biodiversity data exploration into the undergraduate biology curriculum
    Poster on the Biodiversity Literacy in Undergraduate Education (BLUE) project presented at the 2020 BIOME Institute: Cultivating Scientific Curiosity

    Keywords: Biodiversitybiodiversity collectionsBLUEbiodiversity literacy

    888

    views

    182

    downloads

    2

    comments

    0

    adaptations

    Using DNA Subway to Analyze Sequence Relationships
    This is a bioinformatics exercise using the DNA Subway Blue Line, a user-friendly pipeline of bioinformatics tools, to analyze a collection of mosquito DNA bar-code sequences.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignmentC1. Role of bioinformaticsC2. Computational conceptsC4. Bioinformatics toolsC5. Data retrievalC8. Data typesIncubated at NIBLSE

    2905

    views

    551

    downloads

    0

    comments

    2

    adaptations

    2015-Erzo-Luttmer-Four Models of Knowledge Diffusion and Growth
    This paper describes how long-run growth emerges in four closely related models that combine individual discovery with some form of social learning.

    Keywords: knowledge diffusionstationary distributionsproductivity distributionreaction-diffusion equationsquasi-stationary distributions

    94

    views

    53

    downloads

    0

    comments

    0

    adaptations

    2010-Scott_Carrell-James_West-Does_Professor_Quality_Matter-Evidence_from_Random_Assignment_of_Students_to_Professors
    In the postsecondary environment, scores on student evaluations of professors are typically used to measure teaching quality. We possess unique data that allow us to measure relative student...

    Keywords: teachingevaluationfollow-on coursestudent achievement

    149

    views

    38

    downloads

    0

    comments

    0

    adaptations

    HSI - Student Research Journal - Vol.1 Issue 3 - Fall 2020
    The Headwaters Research Experience students have produced some fascinating research throughout our 10-week program. We encourage all to read their reports in our Vol. 1 - Issue 3 - Fall 2020...

    Keywords: scientific methodscience education

    464

    views

    94

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search