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Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    BAG Lab Manual Yeast
    This is the lab manual for yeast chromosome synthesis
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    NIBLSE Incubators: A community-based model for the development of bioinformatics learning resources
    Presentation on NIBLSE incubators at the 2019 Great Lakes Bioinformatics Conference

    Keywords: bioinformaticsNIBLSEBioinformatics Educationincubators

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    QUBES: An education gateway for professional development, OER sharing, and project support
    Poster about QUBES as an education gateway presented at the 2019 ASCN Transforming Institutions

    Keywords: cyberinfrastructureeducation gateway

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    Quantifying and Visualizing Campus Tree Phenology
    This lesson, published on CourseSource, enables collaborative teams to collect, quantify, and analyze observable seasonal changes in nature.

    Keywords: ecologyBiodiversityphenologyplant biologyCourseSource

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    NIBLSE Incubators: A community-based model for the development of bioinformatics learning resources
    Presentation given at GLBIO 2019 on NIBLSE Incubators

    Keywords: bioinformaticsNIBLSEincubators

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    Changing Faculty Practice: Promoting the Scholarship of Teaching with Faculty Mentoring Networks
    Poster presented at Transforming STEM Higher Education: Confirming the Authority of Evidence, AAC&U 2018

    Keywords: faculty mentoring networksquantitative literacyCommunities of Practice

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    HITS: A network to promote high-throughput (HT) approaches through inquiry-based case studies
    Poster on the HITS project presented at the 2018 Annual Fall Conference for the National Center for Case Study Teaching In Science.

    Keywords: case studiesbig dataHITSHigh-throughput Discovery Science & Inquiry-based Case Studies for Today’s StudentsAnnual Fall Conference for the National Center for Case Study Teaching In ScienceBuffalo case studyHigh-throughput (HT) approaches

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    Efficiency of ATP Prodution
    This module introduces the efficiency of ATP production in the context of understanding glycolysis and endergonic reactions. It is intended for an introductory biology audience.

    Keywords: RatiosOpenStaxCellular ProcessesEndergonic ReactionsATPGlycolysis

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    Doubling Time of Tumors
    This module introduces the calculation of potential doubling time of tumorous cells in the context of understanding the growth of a population of the cells. It is intended for an introductory...

    Keywords: linear regressionRatiosCell StructureOpenStaxCell Growth

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    Regulation Across Scales: Data Points Icebreaker Jigsaw
    Students examine regulation at cellular, physiological, and ecological scales in a data-based jigsaw to explore how double-negative logic operates across biological systems. This was used as a...

    Keywords: pathwaysgene regulationtrophic cascadesregulationcross-scalecholesterol synthesisLac OperonYellowstone

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    Joel E. Greengiant Learns About Peas: From Nucleotides to Selection
    This case study follows purveyors of peas, Joel E. and Jolene Greengiant, as they learn about the origin, biochemistry, genetics and eventual artificial selection of sweet (wrinkled) peas, all in...

    Keywords: geneticspopulation geneticsEvolutionintroductory biologycase studybiologyResources @ NSF - NCCSTSmeiosisMendel’s peaspea plantPisum sativumMendel’s Lawsmolecular geneticsmutationnucleotide insertionartificial selectionstarch synthesisstarch branching enzymeplant domesticationlegumesResources @ QUBES - Teaching & Reference

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    Documenting teaching scholarship among undergraduate biology educators using OER
    Poster on the use, adaptation, and reuse of Open Educational Resources within the QUBES community at OpenEd 2018

    Keywords: QUBESadaptationfmnOpenEdteaching scholarship

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    Fostering and Sustaining Interdisciplinary Faculty Communities Around Undergraduate Teaching: Insights from the QUBES Project
    Talk given as a part of the Symposium - Communities of Practice for Math Modeling Education at the SIAM 2018 Conference

    Keywords: SIAMQUBESfaculty communitiesResources @ MMHubResources @ SIAMEd 2018

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    QUBES-ESA partnership uses online Faculty Mentoring Networks to prepare faculty for teaching quantitative biology to undergraduates
    Poster on Faculty Mentoring Networks presented at ESA 2018

    Keywords: faculty mentoring networksResources @ ESA - TIEE

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    Practice module included in Teaching Issues and Experiments in Ecology (TIEE) Volume 10

    Keywords: data analysisResources @ ESA - TIEEclimate changephenologyspecies diversityproblem setWorksheet

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    Faculty professional development in quantitative biology promotes scholarly teaching
    Poster presented at NABT 2017 in St. Louis, Missouri

    Keywords: professional developmentNABTResources @ QUBES - Teaching & Reference

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    QUBES: a collaboration and professional development platform for quantitative biology education
    Presentation given at BEER 2017 in Normal, IL

    Keywords: QUBESBEERResources @ QUBES - Teaching & Referencebeer17

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    Helping teachers and students learn with research data: The role of a scientific gateway for education
    Presentation at the Cary Institute, April 5, 2018

    Keywords: QUBESteaching with data.data literacyPresentation

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    Development of the NIBLSE Learning Resource Collection and Incubators
    Talk on the NIBLSE Resource Collection and Incubators given at several professional development confernces

    Keywords: bioinformaticsNIBLSEincubators

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    Maternal transmission of microbiome
    Understanding the cascading effects of the transfer of maternal microbiome during a vaginal birth (vs. a c-section) to the well-being of a newborn.

    Keywords: microbiomehuman reproduction

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