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    Genome Sequence Data in R using Biostrings (Swirl Lesson)
    By the end of this lesson, students should be able to load FASTA files into R as DNAStringSets and use width() and alphabetFrequency(), combined with other functions like sum() and mean(), to...

    Keywords: R programming languagecourse-based undergraduate research experienceBioinformatics and GenomicsCURECUREscourse-based research experiences (CUREs)STEM CUREsComparative genomicsBioconductor

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    BLAST-HGT PROJECT
    Genome Solver modules were combined to make one project for students using tools within NCBI BLAST to explore phylogenetics and horizontal gene transfer from phage to Chlamydia.
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    REMNet Tutorial, Excel Part 3: Organizing Your Microbiome Data 5.3.19
    Video on organizing microbiome using Excel from the Research Experiences in Microbiomes Network

    Keywords: ExcelVideoMicrobiology Educationmicrobiomesresearch in the classroomREMNeturban microbiomes

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    REMNet: Online Resources 5.3.19
    Video on online resources for studying microbiomes from the Research Experiences in Microbiomes Network

    Keywords: VideoMicrobiology EducationmicrobiomesMicrobiome researchresearch in the classroomREMNet

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    Sequence Similarity in Developmental Biology - A Bioinformatics Exercise Using Myostatin
    This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of...
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    Getting students to reason with data: QUBES tools and teaching resources built for introductory biology
    Workshop presented at the 2019 Biology Learning Community Conference

    Keywords: QUBESdataintroductory biologydata in the classroomQuantitative reasoning

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    A Framework for Teaching Modeling to Biologists
    Abstract for presentation at SIAM ED 2016 on modeling

    Keywords: modelingSIAM

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    Panel Discussion for using QUBES in your classroom
    Abstract for a panel discussion about QUBES. Part of a minisymposium at BEER 2015.
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    How to Design a Classroom Activity that Integrates 3D Print Models with Active Learning
    Student exploration of relevant physical models can deepen knowledge of course material. In this guide we describe a method by which instructors can integrate 3D printing technology with an...

    Keywords: active learning3D print modelsclassroom jigsaw

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    Exploration of the Human Genome by Investigation of Personalized SNPs
    Students often shy away from tedious bioinformatics approaches to exploring their genomes. However, in our expanding digital world these skills are some of the most relevant and valuable. To...

    Keywords: UCSC genome browsersingle nucleotide polymorphismGenome wide association studiesGenomic organization

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    1976-JG-Wagner-Computers in pharmacokinetics
    This is a seminal paper in pharmacokinetics in which the author introduces historic notions and approaches. As can be seen from the abstract there is a variety of material here.

    Keywords: kineticscomputerparametersPharmacologydrugspharmacokinetics

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    Engaging students in data exploration using digital biodiversity databases: BLUE Data Network
    Slides for BLUE presentation at 2020 BIOME Institute: Cultivating Scientific Curiosity

    Keywords: undergraduate researchnatural historyBiodiversitynatural history collectionsbiodiversity collectionsBLUEbiodiversity literacy

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    Data is the New Science - Modified and combined with Following the Data Module
    In this module, students will be introduced to some emerging biodiversity data resources. They will be asked to think critically about the strengths and utility of these data resources and apply...

    Keywords: data in the classroombiodiversity informaticsnatural history collection

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    2014-Patel-Schlijper-Models of Consumer Behavior
    The problem posed to the Study Group was to construct models for consumer behaviour that might be useful in tools for brand management in markets for fast-moving consumer goods.

    Keywords: consumer behaviormarket share

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    Colon Cancer: A Case of Genetic Bad Luck
    Case study developed for an introductory genetics class published in the National Center for Case Study Teaching in Science

    Keywords: bioinformaticsNCBINIBLSEBLASTPublished in National Center for Case Study Teaching in Sciencecolon cancerpedigreegenetic testingAPC

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    Focusing on Civic Engagement: IGELS Tools, Tips, & Strategies to Enhance Undergraduate Biology for Non-majors
    We can help students find relevance when we teach though issues that we experience in our daily lives.​ This workshop session provides an introduction to civic engagement and led participants...

    Keywords: NABT 2022IGELS

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    Creating Inclusive Classes: IGELS Tools, Tips, & Strategies to Enhance Undergraduate Biology for Non-majors
    The syllabus is often your first engagement with students in your courses.​ This workshop session provides an introduction to using a rubric to assess and revise your syllabus to make it more...

    Keywords: NABT 2022IGELS

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    Introduction to IGELS: Tools, Tips, & Strategies to Enhance Undergraduate Biology for Non-majors
    The national network for the Interactions in General Education Life Science Courses (IGELS) is a coalition of biologists and biology educators collaborating to support and mentor “non-major...

    Keywords: NABT 2022IGELS

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    Reasoning and Relevance: IGELS Tools, Tips, & Strategies to Enhance Undergraduate Biology for Non-majors
    We focus on Reasoning and Relevance as key features of curriculum resources for use in non-majors courses. This workshop section provides an overview of how we characterize reasoning and relevance...

    Keywords: NABT 2022IGELS

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    Creating Game-Based IDEAs using Twine (BIOME 2022)
    Games and gamification-principles are powerful tools that increase engagement and improve learning outcomes when applied appropriately to STEM instruction. The interactive nature of games allows...
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