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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    A Fun Introductory Command Line Lesson: Next Generation Sequencing Quality Analysis with Emoji!
    Radical innovations in DNA sequencing technology over the past decade have created an increased need for computational bioinformatics analyses in the 21st century STEM workforce. Recent...

    Keywords: bioinformaticsgenomicscodingJupyter notebookcommand lineCyVersescriptingnext generation sequencing analysis

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    Lateral Transfer Maps as a Metacognitive Tool in First Year STEM Courses
    We introduce the Lateral Transfer Map (LTM), a tool for students to actively and visually explore the transfer of ideas, skills, and concepts across concurrent coursework. The LTM is an extension...

    Keywords: concept mapmetacognitionfirst-year studenttransfer

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    BCEENET: Connecting digitized natural history collections with course-based undergraduate research experiences
    Biological Collections in Ecology and Evolution Network (BCEENET) brings together undergraduate educators, natural history collections professionals, researchers, and data experts to support the...

    Keywords: digitized natural history collectionsBCEENETcourse-based undergraduate research experiences (CUREs)

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    Introduction to Quantitative Biology - Fall 2014 Syllabus
    Syllabus for Introduction to Quantitative Biology taught at the College of William and Mary.

    Keywords: quant biosyllabus

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    Panel: Implementing and distributing learning resources in quantitative biology education
    A panel portion of the session focusing on how individuals would implement the QUBES Hub during their own professional development.

    Keywords: QUBESquantitative biology

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    Rstudio cheatsheets
    Cheatsheets are quickstart guides to using some of the most popular packages and features of Rstudio.

    Keywords: R

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    Built-in Flexibility: Lessons learned to engage your community virtually
    Materials and resources for "Built-in Flexibility," an episode of the webinar series, "Adapting to COVID-19: Resources for Natural History Collections in a New Virtual World."

    Keywords: professional developmentidigbionatural history collectionswebinarcommunity engagementonline eventsonline professional developmentaccess

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    Facilitating the implementation and adaptation of data-centric teaching resources by closing gaps in the Open Education Resource (OER) lifecycle
    Presentation on data-centric open educational resources given at the 2019 UBER-GRC

    Keywords: DIGdata-centric teaching

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    Diversifying and Humanizing Scientist Role Models Through Interviews and Constructing Slide Decks on Researchers’ Research and Life Experiences
    To maintain recruitment and retention, biology teachers face the challenge of finding relatable role models for their students. Our ever-increasing scientific knowledge has been facilitated by...

    Keywords: researchdiversityinclusionScientific ProcessRepresentationScientistRole Models

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    Atlas of Black Scholarship for Inclusive and Racially Diverse STEM Curricula – Volume I
    The contributions of Black scientists to the advancement of STEM are poorly represented in course materials. Here, we provide an Atlas of Black Scholarship to help Life Sciences and Chemistry...

    Keywords: BLACK SCIENTISTS IN STEMRACIALLY-RESPONSIVE PEDAGOGYBIOLOGY AND CHEMISTRY EDUCATIONDIVERSITY IN STEM CURRICULUM

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    BioMap Degree Plan: A project to guide students in exploring, defining, and building a plan to achieve career goals
    Traditional college students begin their academic journey with a variety of ideas about the careers they might ultimately pursue. Some students have always known what they want to do, some have...

    Keywords: Career ExplorationCo-curricularsDegree Planning

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    Tackling "Big Data" with Biology Undergrads: A Simple RNA-seq Data Analysis Tutorial Using Galaxy
    Analyzing high-throughput DNA sequence data is a fundamental skill in modern biology. However, real and perceived barriers such as massive file sizes, substantial computational requirements, and...

    Keywords: bioinformaticsDNA sequenceRNAseqgene expression

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    Advancing Global Learning Through a Collaborative Online International Learning (COIL) Module on the United Nations Sustainable Development Goals (UN SDGs)
    An increasingly interconnected world presents opportunities for globally relevant curricula in the classroom. Implementing collaborative online international learning (COIL) modules within...

    Keywords: Collaborative Online International LearningGlobal LearningPlants and SocietyUnited Nations Sustainable Development GoalsMedicinal PlantsPhytochemicalsPlant Natural Products

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    "I Really Enjoy These Annotations:" Examining Primary Biological Literature Using Collaborative Annotation
    Critically reading and evaluating claims made in the primary literature are vital skills for the future professional and personal lives of undergraduate students. However, the formal presentation...

    Keywords: Stem cellsAdult neurogenesisCRISPR gene editing

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    Getting Started with Universal Design for Learning
    Three resources for faculty interested in an introduction to Universal Design for Learning (UDL).
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    Applying UDL to Existing Materials
    This activity supports instructors in revising materials to incorporate Universal Design for Learning checkpoints.
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    Pre-lesson: Introduction to BLAST
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. This pre-lesson introduces the BLAST tool.

    Keywords: Bioinformatics EducationBioinformatics and Genomics

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    Pre-lesson: Introduction to BLAST
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. This pre-lesson introduces the BLAST tool.

    Keywords: Bioinformatics EducationBioinformatics and Genomics

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    Highlights of the Hewlett-Foundation Grant Award to Bates College (February 2021)
    End-of grant highlights of the Hewlett-Foundation grant award to Bates College: Supporting more equitable and sustainable open education across STEM
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    Why Cells Change Weight: Demonstrating Linear Regression Through an Osmosis Experiment
    In this activity, students will perform an experiment utilizing dialysis tubing to create cellular models to demonstrate the linear relationship between cell weight and time in varying tonicities....

    Keywords: graphingqbccCellular and Molecular BiologyInterpret graphsConcepts in Statistics

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