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    3-090-OneSpringMass-ModelingScenario
    We lead students through building a mathematical model for a single mass (bob)-spring system that is hanging vertically. We also lead the students, using data that they collect together with their...

    Keywords: undampedsum of square errorsmass springHooke's Lawoscilationleast-squares approximation

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    6-026-IsleRoyaleModeling-ModelingScenario
    The primary aim of this project is to draw a connection between differential equations and vector calculus, using population ecology modeling as a vehicle.

    Keywords: ecologyoptimizationpredator-preypopulationvector calculusLagrange multipliersleast squaresIslel Royale

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    3-110-MilitarySpringMassApplication-ModelingScenario
    The is a collection of different scenarios for the shock system of a trailer. In each scenario, students will transform the shock system of a trailer into a second-order differential equation,...

    Keywords: dampingresonancebeatsspring-mass systemLaplace TransfomDirac Delta function

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    3-069-HeatInBar-ModelingScenario
    The temperature distribution along a uniform slender bar due to conduction and convection is investigated through experimental, analytical, and numerical approaches.

    Keywords: heat transferexperimentconductionconvectionboundary conditionsfinite volume method

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    3-070-FallingInWater-ModelingScenario
    We model a small canister with ballast to keep it vertical as it falls through water in a graduated cylinder filled with water. We suggest several models in terms of resistance due to the media and...

    Keywords: datawaterresistancefallingbuoyancymass

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    3-063-FallingBuildingIce-ModelingScenario
    We model the fall of a piece of ice which is falling from a high building in New York City.

    Keywords: resistancefallinggravityiceterminal velocityskyscrapers

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    3-045-RampBounce-ModelingScenario
    Students build two projectile motion models (1) a one-dimensional model for a vertically falling ball from a fixed distance until it hits an inclined ramp and (2) a two-dimensional projectile...

    Keywords: projectile motioninclined rampcoefficient of restitutionoptimal anglebounce

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    "Boost your evolution IQ": An evolution misconceptions game
    Students often enter introductory biology courses with misconceptions about evolution. For example, many students believe that traits arise when a species needs them or that evolutionary processes...

    Keywords: Evolutionactive learningNatural Selectiongroup workmisconceptions

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    Lizard cold tolerance and extreme weather events: a scientist spotlight featuring Dr. Shane Campbell-Staton
    Students interpret experimental and observational data about patterns in cold tolerance in the green anole. They reflect on the experience and identity of the lead researcher based on a video...

    Keywords: climate changeNatural Selectionenvironmental variationphenotypic plasticityacclimationenvironmental conditions

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    Final Project for Calling Bull
    This is the final project for the calling bull course & it is to find 3 pieces of misinformation/BS and debunk them. They have to re-do at least one visualization, use R in at least one debunking,...

    Keywords: statisticsinformation literacycalling bulleportfolio

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    Assessing River Herring Migration Using Nonparametric Analysis
    In this lesson, users will play the role of a fisheries biologist by tackling a contemporary fisheries research problem by performing data normality tests, data transformations, nonparametric...

    Keywords: testR Markdownfisheries scienceanadromouschesapeake bayriver herringfisheries managementelectronic fish counterblueback herringalewifevirginiachickahominyriverwalker's damnonparametricwilcoxonsignedranknormalityfish migration

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    Thinking About Graduate School in Biology: Our Tips for Success
    As part of the iDigTrio 2020 Biological Conference and Fair we created this document to supplement our workshop on "Applying for Graduate school". This is a compilation drawing from the four...

    Keywords: fundingidigbiograduate schoolGraduate assistantshipsiDigTRIOTips and TricksAcademic cultureUnwritten rulesapplicationapplying

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    STEM Inclusive Teaching Practices Webinar Series: Socially Relevant Teaching in the Time of COVID-19
    Presents various mathematical modeling and data science activities created around analyzing and interpreting COVID-19 data. Much of the instructional guidance provided for the activities and...

    Keywords: quantitativemathidigbiodata literacywebinarEDSINBLUEscorecovidSTEMitp

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    The Perfect Brew: An Activity Demonstrating Cell Counting and Hemocytometer Use
    In this activity, students will explore the use of a hemocytometer for counting cells, demonstrate the relationship between the grid seen in the microscope with volume of liquid in suspension and...

    Keywords: RatiosmicrobiologyqbccCellular and Molecular BiologyUnderstanding fractionsconverting unitschanging scalesmeasurements

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    STEM Inclusive Teaching Practices Episode 4
    Beyond Techniques: A Phenomenological Approach to Inclusive Teaching with Dr. Mays Imad.

    Keywords: teaching strategiesinclusionInclusive teachingphenoPhenomenological

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    Exploring Fundamental Concepts of Phage Immunity Systems: A jigsaw activity
    This jigsaw assignment is designed to increase students’ understanding of phage immunity systems
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    Genome Sequence Data in R using Biostrings (Swirl Lesson)
    By the end of this lesson, students should be able to load FASTA files into R as DNAStringSets and use width() and alphabetFrequency(), combined with other functions like sum() and mean(), to...

    Keywords: R programming languagecourse-based undergraduate research experienceBioinformatics and GenomicsCURECUREscourse-based research experiences (CUREs)STEM CUREsComparative genomicsBioconductor

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    Testing hypotheses about the role of wildfire in structuring avian communities
    This module assesses the role of wildfire in the eastern US and its impact on bird communities using NEON bird survey data from pre- and post- a major wildfire in the Great Smoky Mountains National...

    Keywords: data manipulationspecies richnessANOVAspecies diversitybirdswildfireBACI design

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    Exploring how climate will impact plant-insect distributions and interactions using open data and informatics
    This teaching module provides an entry point for students to learn about data science, open data repositories (e.g., citizen science data), and species distribution modeling to study the effects of...

    Keywords: modelingcitizen sciencehypothesis testingdata scienceclimate changeR programming languageBiodiversityplant animal interactionsinquiry-based learningspecies distributionseco-informatics

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    Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach
    This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein...

    Keywords: phylogeneticsbioinformaticssequencingFASTANCBIplant biologyNIBLSEalgorithmsincubatorsPlant and Fungal EvolutionBLASTmultiple sequence alignmentsequence similarityBLOSUM scoring matrixneighbor-joining distance matrixCourseSourcephylogram

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