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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    An Original-Design Board Game to Increase Student Comprehension of Cellular Respiration Pathways
    Cellular respiration is a daunting topic for many students in introductory biology courses. Students are challenged at conceptual and factual levels, since instruction covers multiple metabolic...

    Keywords: GlycolysisCellular RespirationFermentationKrebs CycleOxidative phosphorylationpyruvate oxidation

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    2011-Yuan-EtAl-Real life applications of ODEs for Undergraduates
    This study introduces real-life mathematical theories and models of international relationships suitable for undergraduate ordinary differential equations, by investigating contradicts between...

    Keywords: arms raceRichardson modelBattle of Curupaytíinternational relationships

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    2008-Taro-Blog on Modern Political Economy-Differential Equations in Our Life
    Differential equations - easy to hear but often impossible to solve- are around there in our life. If you are an econ learner, you have much time to express the economy by using differential...

    Keywords: bathtubhot coffeerunning taterexonomicsforgetting

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    1-016-DogDrugs-ModelingScenario
    We offer a problem to determine the necessary drug administration in order to keep a dog sedated with specific information on half-life for an exponentially decaying presence of the drug in the body.

    Keywords: wild_dogsdrug discoveryhalf-lifepentobarbital sodiumanesthesia

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    Life in Urban Environments: The Impact of Urbanization on Life-History Traits in Amphibian Species
    This lesson focuses on urbanization and its negative effects on species, specifically amphibians. The lesson will also provide hands-on statistical analyses and critical thinking questions to...

    Keywords: life historyRStudiofrogstwo-way ANOVAurbanizationamphibianstoads

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    Incubators: Building community networks and developing open educational resources to integrate bioinformatics into life sciences education
    To efficiently and effectively integrate bioinformatics instruction into undergraduate life science curricula, educators would benefit from open access, high-quality learning resources (LRs) for...

    Keywords: bioinformaticsNIBLSEincubatorsLife Science

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    Digital Atlas of Ancient Life | Exploring the Diversity and History of Fossil Life
    The Digital Atlas project include field guides to fossils (including a mobile app), an online paleontology textbook, and a collection of over 500 virtual 3D models of fossil specimens.

    Keywords: Evolutionbiologyidigbiopaleontologytaxonomynatural history collectionsgeologySPNHC2020

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    Avida-ED User Manual
    Basic User manual to use Avida-ED

    Keywords: EvolutionArtificial LifeAvidaavida-ed

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    Development of the NIBLSE Learning Resource Collection and Incubators
    Talk on the NIBLSE Resource Collection and Incubators given at several professional development confernces

    Keywords: bioinformaticsNIBLSEincubators

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    Developing Data Literacy Skills and Connecting the Student Experience in the Classroom to the Community Through Biodiversity Projects
    Undergraduate education and long-term science literacy are enhanced by integrating data projects with public datasets and creating analysis summaries. Underutilized public datasets are often...

    Keywords: species richnessBiodiversitydisturbanceHabitat rangePopulation abundance

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    A Hands-on Introduction to Hidden Markov Models
    In this Lesson, we describe a classroom activity that demonstrates how a Hidden Markov Model (HMM) is applied to predict a eukaryotic gene, focusing on predicting one exon-intron boundary. This HMM...

    Keywords: transcriptionexonintronsplicing

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    Microbiology Data Problems 2023
    This project focuses on the use of data analysis problems to introduce students to specific topics in microbiology and to give them practice in the interpretation of figures and tables of data. ...

    Keywords: data analysisundergraduate educationmicrobiologyjournal articles

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    Serenity now! Keep calm and do science with real data in the classroom
    Presentation on a free web application currently under development on QUBES called Serenity at the 5th Life Discovery Conference

    Keywords: data sciencetool:serenity5th Life Discovery- Doing Science Education conference (LDC)5th Life Discovery Conference

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    Using Linear Regression Adaptation: Exploring Vector-borne diseases in an online classroom
    In this adaptation students in online classrooms will use linear regression at home and in synchronous online time to analyze real data on vector-borne diseases and explore how environmental...

    Keywords: ecologygraphingmicrobiologyqbccUnderstanding ratesCreate graphsInterpret graphsinterpret tablesConcepts in Statistics

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    Single Factor Analysis of Variance (ANOVA)
    This swirl lesson introduces students to theoretical and practical concepts about single-factor ANOVA analysis and an approach to conduct this type of analysis using R.

    Keywords: ANOVATukey HSD

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    Analysis of Amylase Activity
    This lab is an exploration of enzyme function and the effects of environmental conditions on the activity of the enzyme amylase. The lab utilizes analytical and graphing skills to assess enzyme...

    Keywords: data analysisintroductory biologyconcentrationgraphinglinear equationsBiochemistryscientific methodstandard curveenzyme functionMicrosoft ExcelInterpreting GraphsenzymesqbccCreate graphsInterpret graphsSolving Equations and Inequalitiesinterpret tablesAmylaseAlpha-amylaseEnzyme activityMaltoseDNS assayAbsorbancelab reportspectrophotometryregression linemanipulating equationsline of best fitgraphing by hand

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    Understanding Global Climate Change: Present, Past, and Future
    Understanding global climate change through the lenses of the present, past, and future, combining modern technology and indigenous knowledge and ways of knowing.

    Keywords: climate changeglobal changeabiotic environmentindigenous knowledge

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    Why are Cells Small? Surface Area to Volume Ratio
    This module explores surface area to volume ratios in a cube and sphere in relation to cell size.

    Keywords: introductory biologygraphingRatiosOpenStaxqbccmanipulate equationsCellular and Molecular BiologyUse elementary functionsCreate graphsInterpret graphsRates and ProportionsSolving Equations and Inequalitiesinterpret tables

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    More In Depth Spreadsheet Management Adaptation of Data Management using NEON Small Mammal Data
    This adaptation consists of three exercises that introduce students to 1) format spreadsheet data tables, 2) carry out spreadsheet quality control, and 3) count/sort/filter data of interest in...

    Keywords: data managementspreadsheetsmammalsCapture mark-recapture

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    What's in this? Students Deliberate on Endocrine Disrupting Chemicals Found in Everyday Healthcare Items to Build Democratic Skills
    In helping our students become informed and active members of society, it is necessary that they develop certain skills that will empower them to improve their community and governance. These...

    Keywords: cellEndocrinehormones

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