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    2012-Michael_Kerckhove-From Population Dynamics to Partial Differential Equations
    This article illustrates PDE models for location-dependent carrying capacities, migrations, and the dispersion of a population.

    Keywords: population dynamicslogistic equationlocation-dependent carrying capacities

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    2010-Randy_Boucher-Determining Dissolved Oxygen Levels
    This is a full module given to students and the article contains comments for instructors as well.

    Keywords: Environmental Engineeringbiochemical oxygen demandoxygen level

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    1999-T_Chen-HL_He-GM_Church-S_Shafer-Modeling Gene Expression with Differential Equations
    The paper proposes and give great detail for a differential equation model for gene expression with two methods for constructing the model from a set of temporal data.

    Keywords: gene expressiongenekineticgene translationgene transcription

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    Math Skills in Biology Education: A Principles Focused Evaluation (PF-E) of Community College Faculty Needs
    Poster on math skill instruction in community colleges presented at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: mathcommunity colleges2019 QUBES/BioQUEST Summer Workshop

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    1-127-FishHarvesting-ModelingScenario
    We offer students a harvesting model for operating a fishery over a 25 year horizon and ask them to write a report on optimal harvesting policy with their analyses for fishing industry experts (not...

    Keywords: Management Of Dataoptimal controlfisherieslogisticharvestingmaximum sustainable yield

    248

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    An Introduction to Statistical Learning: with Applications in R
    This book provides an introduction to statistical learning methods and is aimed for upper level undergraduate students, masters students and Ph.D. students in the non-mathematical sciences.

    Keywords: linear regressiontextbookclassificationcourseclustering coefficientR programming languagestatistical learningmachine learninglogistic regressionresamplingmodel selectionGeneralized additive modelsdecision treesprincipal components analysisMOOCResources @ QUBES - Teaching & Reference

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    1992-John_Mathews-Bounded population growth-a curve fitting lesson
    The purpose of this article is to present two methods for fitting the logistic curve to data supplied by the U. S. census bureau.

    Keywords: datalogisticlinearizationfitting

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    Colon Cancer: A Case of Genetic Bad Luck
    Case study developed for an introductory genetics class published in the National Center for Case Study Teaching in Science

    Keywords: bioinformaticsNCBINIBLSEBLASTPublished in National Center for Case Study Teaching in Sciencecolon cancerpedigreegenetic testingAPC

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    2011-Brian_Winkel-Sourcing_for_parameter_estimation_and_study_of_logistic_differential_equation
    We present two simulation activities for students to generate real data and several data sources for the purpose of estimating parameters in the logistic differential equation model.

    Keywords: dataparameter estimationparameterlogistic equationsource

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    BioSkills Guide
    The BioSkills Guide comprises program- and course-level learning outcomes for the Vision and Change core competencies that elaborate what general biology majors should be able to do by the time...
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    2012-Brian_Ingalls-Mathematical Modelling in Systems Biology An Introduction
    This is a comprehensive text with much biology background to motivate the mathematical modeling, exercises and answers, and many rich examples.

    Keywords: spatialsensitivity analysisgene regulatory networksstochasticbifurcationmetabolic networkselectrophysiologytransductionrate lawsbiochemical reactions

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    Learn Biological Sciences and Mathematics through cellular respiration, photosynthesis and primary productivity.
    Photosynthesis is a process by which plants synthesize glucose and oxygen in presence of sunlight through light dependent reactions by utilization of sunlight, water to synthesize oxygen, ATP and...

    Keywords: mathematicssimulationThe Analysis of Biological DataMetabolic Pathwaysprocess of sciencephotosynthesisqbccBiological ScienceshypothesisCellular Respirationprimary productivity

    909

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    Reflective Writing Adapted for Non-Majors
    This activity introduces the research showing a benefit of reflective writing, and then uses a modified version of the prompt from Park et al. to provide practice. The prompts have been modified...

    Keywords: writingreflective writingmath attitudesResources @ BIOMAAP

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    2014-Eckhoff-EtAl-Fun with maths-exploring implications of mathematical models for malaria eradication
    . In this note, four examples demonstrate both the effects of model structures and assumptions and also the benefits of using a diversity of model approaches fomalaria eradication strategies.

    Keywords: vaccinemalariamigrationeradicationseasonality

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    1-125-DiceyPopulation-ModelingScenario
    We offer students an opportunity to generate data for their team on a death and immigration model using 12 and 20 sided dice and then pass on the data to another student team for analysis with a...

    Keywords: simulationimmigrationdeathdice

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    2010-Roberto_Munoz-Alicea-Mathematical Model for Enzyme Kinetics-Multiple Timescales Analysis
    We study a basic model for enzyme substrate reaction. Through several assumptions and via nondimensionalization, we simplify the equations.

    Keywords: kineticsEnzymesubstratenondimensionalizationmultiple timescales

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    Bioinformatics: the Power of Computers in Biology – a Practical Guide
    This Practical Guide in the Bringing Bioinformatics into the Classroom series introduces simple bioinformatics approaches for database searching and sequence analysis.

    Keywords: NIBLSEGOBLET

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    Bioinformatics: An Interactive Introduction to NCBI
    Modules showing how the NCBI database classifies and organizes information on DNA sequences, evolutionary relationships, and scientific publications. And a module working to identify a nucleotide...

    Keywords: NCBINIBLSEDNABLASTnucleotide sequencing

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    2020-Cline_Fasteen_Francis_Sullivan_Wendt-Vision_for_Projects_Across_Mathematics_Curriculum
    We consider the use of projects in math courses as a mechanism for promoting coding, communication, and interdisciplinary application of math skills. Final projects play an important role, but we...

    Keywords: modelinginterdisciplinarywritingcodingprojecttechnical writing

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    Making Change Sustainable: Network for Integrating Bioinformatics into Life Sciences Education (NIBLSE) Meeting Review
    The purpose of the meeting described in this review was to decide how best to ensure the sustainability of the Network for Integrating Bioinformatics into Life Science Education (NIBLSE; pronounced...

    Keywords: meetingsustainabilityfmnNIBLSEincubator

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