You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Dynamic Programming
    In bioinformatics, dynamic programming is mainly used to align nucleotide and amino acid sequences, and to predict RNA and protein folding from primary sequence data.

    Keywords: RNAamino acid sequenceSequence alignmentdynamic programmingprotein folding

    12

    views

    1

    downloads

    0

    comments

    0

    adaptations

    Digital Intro: Revitalizing the “Introduction to Psychology” course through Project-based Learning
    Welcome to Digital Intro where we are transforming introductory courses into active, project-based experiences. Our projects expose students to a wide range of digital skills as they learn...

    Keywords: psychologyDigital IntroIntroduction to PsychologyIntroductory PsychologyGeneral Psychology

    138

    views

    22

    downloads

    0

    comments

    0

    adaptations

    Data-Driven Decision-Making: Antarctic Fisheries
    This is an entire module for a general education data science and ecology course. The module was originally designed as the fourth and final section of the course; the full course is openly...

    Keywords: population growthRStudiodata visualizationexponential growthlogistic growthR Markdownspatial dataocean sustainability4DEE FrameworkTraditional ecological knowledgecarrying capacityEcosystem Servicesmaximum sustainable yield

    166

    views

    86

    downloads

    0

    comments

    0

    adaptations

    DCS 105 Calling Bull F24 Schedule
    Schedule overview for Bates College Course DCS 105 Calling Bull

    Keywords: datacalling bullmisinformationBates CollegeSchedule

    105

    views

    25

    downloads

    0

    comments

    0

    adaptations

    Breaking It Down: What Factors Control Microbial Decomposition Rates?
    Demonstrating and modeling changes in ecosystem processes in the laboratory classroom can be logistically difficult and expensive. This complexity often leaves little time for students to generate...

    Keywords: data analysishypothesis testingdata visualizationdata managementMicrobial RespirationDecompostionAbiotic ConditionsResults Communication

    635

    views

    40

    downloads

    0

    comments

    0

    adaptations

    Climate Change’s Impact on Sea Level Rise in a Coastal Marsh Over 20 Years
    In this lesson, students will learn about increasing sea level rise and the direct impacts coastal marshes are facing as a result. Students will learn the importance of coastal marshes, tidal...

    Keywords: climate changewetlandsSea level rise and coastal resilienceCoastal wetlandssalt marshneap tidesspring tides

    204

    views

    164

    downloads

    0

    comments

    0

    adaptations

    Pennies to The Moon Data Byte Series
    This series of Rbyte activities explores the concept of debunking using Fermi Estimation, R, and ChatGPT.

    Keywords: RprogrammingOpen SourceOpen Sciencedata literacycalling bullProgramming practiceFermi EstimationChatGPTGoogle CoLab

    178

    views

    133

    downloads

    0

    comments

    0

    adaptations

    SIMIODE Spring 2024 Webinars - WikiModel
    WikiModel is cloud-based application and requires no installation and is run via a web-browser to facilitate rapid implementation. Equations are typed in as they appear in a textbook. ODEs are...

    Keywords: modelingSoftwaretoolapplicationWikiModelmodeling cycle

    145

    views

    61

    downloads

    0

    comments

    0

    adaptations

    A Customizable Inquiry-Based Statistics Teaching Application for Introductory Biology Students
    Building strong quantitative skills prepares undergraduate biology students for successful careers in science and medicine. While math and statistics anxiety can negatively impact student learning...

    Keywords: introductory biologyQuantitative reasoningInclusive teachingauthentic inquiryInferential statisticsInstructional scaffolding

    848

    views

    293

    downloads

    0

    comments

    0

    adaptations

    The Power of Place: A Course-Based Undergraduate Research Experience Studying Urban Ecology, Local Apple Trees and Disease Susceptibility
    Course-based Undergraduate Research Experiences (CUREs) offered early in an undergraduate student’s career have the potential to include a greater number and diversity of students than...

    Keywords: Disease ecologyurban ecologyUrban food forestsUrban heat islandsGenetic resistance

    1968

    views

    134

    downloads

    0

    comments

    0

    adaptations

    Turning ecological research into engaging online modules for undergraduates through Gala/OCELOTS
    Learn how to create and implement online modules in tropical ecology for undergraduates. In an NSF-funded network, researchers and specialists in 4DEE, pedagogy, interactive data tools, and media...

    Keywords: tropical biologyOCELOTSLDC2023

    622

    views

    215

    downloads

    0

    comments

    0

    adaptations

    Module M.5 Linear mixed-effects models
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    451

    views

    181

    downloads

    0

    comments

    0

    adaptations

    Module M.1 R basics for data exploration and management
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    788

    views

    480

    downloads

    0

    comments

    0

    adaptations

    Introduction to Primate Data Exploration and Linear Modeling with R
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology research students on data management and statistical...

    Keywords: R programming languageprimatespopulation ecology

    2862

    views

    247

    downloads

    0

    comments

    0

    adaptations

    Module M.8 Survival analysis
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    364

    views

    146

    downloads

    0

    comments

    0

    adaptations

    Central Dogma, Dictionaries, and Functions: Using Programming Concepts to Simulate Biological Processes
    Technologies like next-generation sequencing, proteomics, and high-throughput phenotyping have transformed the way we do biology. There is a continued need for scientists with computational skills...

    Keywords: computationpythonJupyter notebookFunctionscentral dogmaDictionaries

    1093

    views

    142

    downloads

    0

    comments

    0

    adaptations

    Module M.7 Generalized linear mixed-effects models
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    413

    views

    168

    downloads

    0

    comments

    0

    adaptations

    Module M.6 Generalized linear models
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    428

    views

    153

    downloads

    0

    comments

    0

    adaptations

    Module M.4 Simple linear regression analysis
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    708

    views

    385

    downloads

    0

    comments

    0

    adaptations

    Module M.3 Visualizing data with ggplot2
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    405

    views

    209

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search