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Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Bird watching: An easy way to get students collecting real biological data
    Poster on ways to implement citizen science-based bird watching into education. Presented at the 2021 BIOME Institute.

    Keywords: citizen sciencebirdsquantitative analysisdata collection2021 BIOMEbird watching

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    Implementing Flexible Learning Projects to support authentic research experiences in Ecology (BIO 3317) at McDaniel College
    This adaptation highlights the utility of the Lichens in YOUR Local Landscape module for teaching field skills, quantitative analysis across scales, and for writing research papers.

    Keywords: NEONNational Ecological Observatory Network

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    The Ames Test
    Introduction to the Ames Test, published as GSA Learning Resource

    Keywords: geneticsNIBLSEDNAames testassay

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    Intro to Data Types and Graphing Lab
    This is the third lab in an Introductory Physical Geography/Environmental Studies course. It introduces students to different data types (qualitative vs quantitative), basic statistical analyses...
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    Electronic Lab Notebooks: Options for Building Data Management and Quantitative Reasoning Skills
    Presentation on Electronic Notebooks and Lab Archives given at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: 2019 QUBES/BioQUEST Summer Workshopelectronic notebookselectronic lab notebookslab archives

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    Investigating Determinants of Richness in Ephemeral and Permanent Wetlands Using Linear Models in Shiny
    This resource seeks to provide a quantitative platform by which students can be taught about interactive effects using the TIEE module created by Little (2018). Key to the adaptation is the use of...

    Keywords: aquatic macroinvertebrateslinear regressionhypothesis testingshinywetlands

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    Fostering and Sustaining Interdisciplinary Faculty Communities Around Undergraduate Teaching: Insights from the QUBES Project
    Talk given as a part of the Symposium - Communities of Practice for Math Modeling Education at the SIAM 2018 Conference

    Keywords: SIAMQUBESfaculty communitiesResources @ MMHubResources @ SIAMEd 2018

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    Helping teachers and students learn with research data: The role of a scientific gateway for education
    Presentation at the Cary Institute, April 5, 2018

    Keywords: QUBESteaching with data.data literacyPresentation

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    Using HHMI Tutorials to Prepare Students for Investigating Authentic Datasets in Biology
    HHMI tutorial modules were modified and condensed to bring all students up to the same skill level, and students took a pre-assessment to demonstrate adequate preparation for class.

    Keywords: Scientific ProcessStatistics and MathScientific Methodology

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    Robot vs. Disease: Using CellProfiler to model biomedical research in your classroom
    Resource from the 2015 BioQUEST Summer Workshop

    Keywords: image analysisCellProfilerfluorescence microscopymicroscopycellular analysis

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    AIMS- Analyzing Images to learn Mathematics and Statistics - studying leaf cutter ants to learn linear regression
    This is a teaching resource that uses fascinating images and videos of leaf cutter ants foraging in Panama to provide an engaging context for students to learn about mathematics and statistics.

    Keywords: statisticsmoduleecologydata analysisleaf cutter antsmorphologyforagingallometryeusociallinear regressionimage analysisin-class activitylab protocolproject

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    Using gross parasites to sneak even grosser equations into the introductory biology classroom
    This was an oral presentation at the 2015 Annual Meeting of the American Society of Parasitologists in Omaha, NE.

    Keywords: ParasitologyAmerican Society for Parasitologists

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    QUBES: Supporting faculty in the teaching of mathematical biology
    Abstract for a presentation that was part of a minisymposium at SMB 2015.

    Keywords: QUBESfaculty mentoring networksmentoring

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    EREN PFPP Species Composition Curriculum Module with Data
    In this lab, students will learn foundational concepts of forest community dynamics and apply quantitative skills to data analysis and interpretation activities. Students will use tree plot data...

    Keywords: forest ecologyecologydata analysisdata in the classroomCommunity Ecologyscience educationcourse-based undergraduate research experiencecurriculum materialsPlant EcologyPlant community assemblyCollaborative researcheren

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    Kinetics of a Highly Conserved Enzyme - Carbonic Anhydrase
    This module contains exercises designed to introduce students to graphical representation of biological data. Students will explore the fundamental principles of enzyme kinetics including...

    Keywords: Excelintroductory biologycell biologygraphingslopeQuantitative reasoningdata visualizationquantitative biologyinterdisciplaryquantitative skillscorrelationenzyme functionInterpreting GraphsMichaelis-Mentenenzyme kineticsEnzyme activityenzyme inhibitionLinear and nonlinear analysisNIQBC2. Data and GraphsC4. mathematical modelsenzyme-substrateNIQB Interdisciplinary Quantitative Reasoningcarbonic anhydrase

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    QUBES-ESA partnership uses online Faculty Mentoring Networks to prepare faculty for teaching quantitative biology to undergraduates
    Poster on Faculty Mentoring Networks presented at ESA 2018

    Keywords: faculty mentoring networksResources @ ESA - TIEE

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    The Stomata Lab. What the past can tell us about our future - using fossil and modern plants to model atmospheric carbon dioxide
    Students will develop a mathematical model of the relationship between atmospheric CO2 and the number of stomata on a leaf (Stomata Index). They will evaluate the model graphically, statistically,...

    Keywords: introductory biologyQuantitative reasoninginterdisciplinaryclimate changeregressionEcology and EvolutionStomataNIQBC2. Data and GraphsC4. mathematical modelsC3. Statistical AnalysisSmithsonian

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    The impact of diversifying and humanizing science role models on student attitudes and interest in science careers
    We introduced diverse and humanized scientist role models into data literacy instruction and quantified changes in student attitudes towards science. We found that the impact of science role models...
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    QB@CC: An interdisciplinary network model for developing and disseminating OER to support pedagogical change
    Presentation given at the Northeast OER Summer 2022 We describe the interdisciplinary network that has been developing and sharing quantitative skills-based OER in biological sciences. The...

    Keywords: Resources @ BioQUESTqbccNortheast OER Summit

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    Undergraduate Research and Microbiology Science Community (µRAMS) lighning talk BIOME Institute 2021
    The uRAMS (undergraduate Research and Microbiology Science community) was created by faculty and researchers at Colorado State University as part of our engagement with the 2021 BIOME Institute....

    Keywords: undergraduate researchcritical readingMicrobiology Educationundergraduate educationquantitative skillsScience Communicationdei

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