You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Mol* Adaptation: Case of Severe Insulin Resistance
    This is an adaptation using Mol* on the original case written. This case focuses on understanding how a mutation in a cell signalling protein (a kinase) can prevent insulin function and lead to...

    Keywords: molecular visualization and analysisPDBMolecular Case Studyinsulin resistanceMol*MolStar

    863

    views

    151

    downloads

    0

    comments

    0

    adaptations

    Evo-Ed: Cases for Effective Evolution Education
    BioQUEST 2018 Education Resources for Evo-ED.
    1327

    views

    2311

    downloads

    0

    comments

    0

    adaptations

    2015-The European Bioinformatics Institute-BioModels Database
    BioModels Database is a repository of computational models of biological processes. Models described from literature are manually curated and enriched with cross-references.

    Keywords: computational biologyBioModels Databasebio databaselife science experiments

    112

    views

    63

    downloads

    0

    comments

    0

    adaptations

    "What's on your plate?" with Adam Cornish, PhD
    This talk delves into “Modern Agriculture: What’s on Your Plate?” with Dr. Adam Cornish. Adam is a program analyst in the Office of Agricultural Policy at the State Department, and received his...

    Keywords: agriculturePublic PolicyGMOs

    563

    views

    96

    downloads

    0

    comments

    0

    adaptations

    SKILLS DEVELOPMENT - Toxicology MSDT
    On this website you can find 6 learning modules on various topics in toxicology. These are self-paced student-centered online learning modules. You will receive a certificate of completion at the...

    Keywords: pathophysiologyregulatory toxicologyprinciples of toxicologybiochemistry and molecular geneticsprinciples of genetic toxicologyapplied systems toxicology

    607

    views

    141

    downloads

    0

    comments

    0

    adaptations

    Students examine the diversity of human cell sizes and number using scientific notation
    In this powerpoint, several of the resources from the published module 'Sizes, Scales and Specialization' are used to create a mini-module that has students examine the size and abundance of...

    Keywords: ExponentsRatiosqbccmanipulate equationsCellular and Molecular Biologyconverting unitschanging scales

    874

    views

    246

    downloads

    0

    comments

    0

    adaptations

    Visualization: Quantitative reasoning via image analysis, networks, topology, generative models, and 3D rendering
    Resource from the 2015 BioQUEST Summer Workshop
    1147

    views

    57

    downloads

    0

    comments

    0

    adaptations

    Using Open-Source Bioinformatics and Visualization Tools to Explore the Structure and Function of SARS-CoV-2 Spike Protein
    The relationship between protein structure and function is a foundational concept in undergraduate biochemistry. We find this theme is best presented with assignments that encourage exploration and...

    Keywords: bioinformaticsmolecular modelingCOVID19protein structure and functionUCSF ChimeraSARS-CoV-2 spike proteinACE2 receptor

    3526

    views

    377

    downloads

    0

    comments

    0

    adaptations

    Joel E. Greengiant Learns About Peas: From Nucleotides to Selection
    This case study follows purveyors of peas, Joel E. and Jolene Greengiant, as they learn about the origin, biochemistry, genetics and eventual artificial selection of sweet (wrinkled) peas, all in...

    Keywords: geneticspopulation geneticsEvolutionintroductory biologycase studybiologyResources @ NSF - NCCSTSmeiosisMendel’s peaspea plantPisum sativumMendel’s Lawsmolecular geneticsmutationnucleotide insertionartificial selectionstarch synthesisstarch branching enzymeplant domesticationlegumesResources @ QUBES - Teaching & Reference

    1579

    views

    246

    downloads

    0

    comments

    0

    adaptations

    Assessment of Science Inquiry
    Resource from the 2015 BioQUEST Summer Workshop

    Keywords: assessmentconceptsSoTL

    1555

    views

    437

    downloads

    0

    comments

    0

    adaptations

    Going from student to medical doctor. The pathway to medicine with Abel Edossa and Dr. Oluwatoyin Weaver
    In this "lunch with a Scientist" episode, we interviewed a medical student and medical doctor to help us understand the path to medicine. Becoming a medical doctor is a very daunting task but with...

    Keywords: medicine

    426

    views

    78

    downloads

    0

    comments

    0

    adaptations

    Introductory Video and worksheets on Module 1 and 2 on "Sequence Similarity: An inquiry based and under the hood..."
    The video walks the students to complete Module 1 and 2 on Sequence Similarly and Alignment adapted from Tapprich (2019) and Hudson Alpha that teaches these modules within the context of the...

    Keywords: bioinformaticssequencingFASTANCBINIBLSEalgorithmsBLASTmultiple sequence alignmentsequence similarityBLOSUM scoring matrixCourseSource

    1129

    views

    1129

    downloads

    0

    comments

    0

    adaptations

    Murder by HIV? Undergraduate edition
    Bioinformatics case study focusing on phylogenetic tree interpretation, published in the National Center for Case Study Teaching in Science

    Keywords: case studyResources @ NSF - NCCSTSbioinformaticsNIBLSEHIVnucleotide sequencingphylogenetic treeviral life cyclesmutation ratesreverse transcriptase sequences

    613

    views

    121

    downloads

    0

    comments

    0

    adaptations

    Uninhibited Growth of Cells
    In this activity, students will explore the concept of binary fission, generation time, and bacterial growth curves, with an emphasis on the log phase. Students will use semi-log graphs and linear...

    Keywords: graphingexponential growthMicrobiology Educationmicrobiologybacteriagrowth rateUndergraduate STEM educationCommunity College Educationqbccmanipulate equationsCellular and Molecular BiologyCreate graphsInterpret graphsbinary fissionsemi-log graphlinear graphgrowth curvecreating graphsExponential and Logarithmic Functions

    807

    views

    1089

    downloads

    0

    comments

    0

    adaptations

    Hemoglobin bioinformatics
    This is an introduction to bioinformatics using hemoglobin as an example. The worksheets introduce students to resources to explore the DNA, RNA and polypeptide linear structure with a brief...

    Keywords: bioinformaticsHemoglobinBLASTsickle cell diseaseMolecular Case StudyClustal OmegaMolCaseNet

    845

    views

    1383

    downloads

    0

    comments

    0

    adaptations

    The p53 Gene and Cancer
    This tutorial describes the structure and function of the p53 protein, how its activity is regulated in cells, and how mutant versions of p53 can lead to cancer.

    Keywords: Resources @ HHMI - BioInteractiveBiochemistrymolecular biologymacromoleculesGenetic disease

    3251

    views

    418

    downloads

    0

    comments

    1

    adaptations

    Drug screening and cancer resistance: EGFR Activity
    This activity explores a specific gene (egfr) and its role in cancer. EGFR was introduced with the Gene Card Activities, researched throughout the semester, and then authentic image data of...

    Keywords: Resources @ HHMI - BioInteractivegenomicscancergenetic basis of diseasebiology of cells

    1267

    views

    1381

    downloads

    0

    comments

    0

    adaptations

    Monkey Opsins
    This case will examine the evolution of trichromatic vision in old world monkeys.

    Keywords: modulephylogeneticsecologycell biologymolecular geneticsResources @ EvoEd

    1539

    views

    237

    downloads

    0

    comments

    0

    adaptations

    Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses
    This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

    Keywords: phylogeneticsbioinformaticssequencingFASTANCBINIBLSEalgorithmsincubatorsBLASTmultiple sequence alignmentsequence similarityBLOSUM scoring matrixneighbor-joining distance matrixCourseSourcephylogramZika virus

    4545

    views

    803

    downloads

    1

    comments

    8

    adaptations

    DataNuggets Resources
    DataNuggets Resources

    Keywords: DataNuggets

    2147

    views

    273

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search