You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Value of Mistakes
    This module familiarizes students with brain research describing our physiological response to mistakes, and how making mistakes is a useful part of learning.

    Keywords: growth mindsetmath attitudesResources @ BIOMAAPmistakesvalue of mistakes

    1915

    views

    952

    downloads

    0

    comments

    2

    adaptations

    2017-Bonin-EtAl-Mathematical modeling based on ordinary differential equations - promising approach to vaccinology
    As a proof of concept, we developed a model of the immune response to vaccination against the yellow fever. Our simulations have shown consistent results when compared with experimental data...

    Keywords: immune systemyellow fevercomputational immunologycomputational vaccinology

    109

    views

    40

    downloads

    0

    comments

    0

    adaptations

    2016-Bonin-EtAl-Mathematical modeling based on ordinary differential equations-vaccinology
    We developed a model of the immune response to vaccination against the yellow fever. Our simulations have shown consistent results when compared with experimental data available in the literature.

    Keywords: Immunologyimmune systemAntigenvaccinologyyellow fever

    111

    views

    61

    downloads

    0

    comments

    0

    adaptations

    2013-Clarke-Skirba-Rationale and resources for teaching the mathematical modeling of athletic training and performance
    It is advisable that the professionals involved learn the various tools available for designing effective training programs.

    Keywords: fitnessexercise physiologycritical power modelBanister impulse-response modelcoaching educationphysical fitnessperformance modeling

    102

    views

    31

    downloads

    0

    comments

    0

    adaptations

    2006-Loyd-Wodarz-Drug Resistance in Acute Viral Infections-Rhinovirus as a Case Study
    We develop an epidemiological model that can be used to address the spread of resistance at the population level, and a virus dynamics model that can be used to study the dynamics of virus over the...

    Keywords: stabilityresistancevirusdrugepidemic competitionimmune responserhinovirus

    102

    views

    41

    downloads

    0

    comments

    0

    adaptations

    2019-Stender_EtAl-Recovery_Of_Differential_Equations_From_Impulse_Response
    In this work, a recent method, which allows reconstructing differential equations from time series data, is extended for higher degrees of automation.

    Keywords: time seriesregressionresponseimpulseoscillationsignal processingsparse regressionsystem identification

    763

    views

    38

    downloads

    0

    comments

    0

    adaptations

    Learning Journal Assignment on Biofilms
    This is a learning journal assignment with constructive response questions on Biofilms which undergraduate students can complete with aid of reading a research article and listening to a podcast.

    Keywords: educationPodcastmicrobiologygenomicsUndergraduateAnalysisBioflimsLearning Journal Assignmet

    252

    views

    44

    downloads

    0

    comments

    0

    adaptations

    Tiny Earth: Studentsourcing antibiotic discovery
    Poster on Tiny Earth presented at the 2020 BIOME Institute: Cultivating Scientific Curiosity

    Keywords: antibiotic-resistancesoil microbiologyTiny Earth

    853

    views

    194

    downloads

    0

    comments

    0

    adaptations

    Chemoreception
    This module introduces the probability of cell and molecule collisions in the context of understanding chemoreception. It is intended for an introductory biology audience.

    Keywords: linear equationshyperbolic equationsCellular ProcessesChemoreception

    791

    views

    148

    downloads

    0

    comments

    0

    adaptations

    Changes in Lake Ice: Ecosystem Response to Global Change
    Data Set included in included in Teaching Issues and Experiments in Ecology (TIEE) Volume 3

    Keywords: Resources @ ESA - TIEE

    1532

    views

    221

    downloads

    0

    comments

    5

    adaptations

    Changes in Lake Ice: Ecosystem Response to Global Change
    This is an FMN participant modification of the TIEE module "Changes in Lake Ice: Ecosystem Responses to Global Change," authored by Robert Bohanan, Marianne Krasny, and Adam Welman in 2005.

    Keywords: ecologyIntroductoryfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelActivity LengthMore than 1 hour

    1572

    views

    248

    downloads

    0

    comments

    0

    adaptations

    Teaching Notes for Changes in Lake Ice: Ecosystem Response to Global Change
    This is an FMN participant modification of the TIEE module "Changes in Lake Ice: Ecosystem Responses to Global Change," authored by Robert Bohanan, Marianne Krasny, and Adam Welman in 2005.

    Keywords: ecologyLabfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

    1811

    views

    367

    downloads

    0

    comments

    0

    adaptations

    2014-Enderling-Chaplain-Mathematical Modeling of Tumor Growth and Treatment
    Herein we describe fundamentals of mathematical modeling of tumor growth and tumor-host interactions, and summarize some of the seminal and most prominent approaches.

    Keywords: cancertumor modelingangiogenesistumor growthpatient care

    153

    views

    73

    downloads

    0

    comments

    0

    adaptations

    2011-Kenny_Harwood-Modeling a RLC Circuit Current with Differential Equations
    This paper gives an abbreviated description of the photovaltaic effect (solar power production process) and then a RLC circuit will be modeled that is powered by a photovaltaic panel.

    Keywords: tuningfrequency responseLC circuitRLC

    111

    views

    43

    downloads

    0

    comments

    0

    adaptations

    2009-Das-EtAl-Bioeconomic harvesting of a pre-predator fishery
    This paper deals with the problem of non-selective harvesting of a prey–predator system by using a reasonable catch-rate function instead of usual catch-per-unit-effort hypothesis.

    Keywords: predator-preyharvestingPontryagin’s maximum principlebioeconomicbionomic equilibriumbiotechnical productivitycatch-rate functionoptimal equilibrium

    207

    views

    35

    downloads

    0

    comments

    0

    adaptations

    Ocean Acidification: Predator-Prey Interactions of Intertidal Snails and Sea Stars
    This lesson discusses ocean acidification, its causes, and the potential dangers that it may pose to aquatic ecosystems by analyzing the relationship between intertidal invertebrates. While...

    Keywords: predator-prey interactionsocean acidification

    478

    views

    431

    downloads

    0

    comments

    0

    adaptations

    2017-David_Morin-Oscillations
    So needless to say, an understanding of oscillations is required for an understanding of waves.

    Keywords: dampingfrequency responseresonanceoscillationbeatsunderdampingharmonic oscillatorsover dampingcritical damping

    116

    views

    60

    downloads

    0

    comments

    0

    adaptations

    Cold blood and wet skin in hot and dry secondary forests. How do amphibian traits determine persistence in secondary forests?
    Students will synthesize information from biological and physiological traits of amphibians and characteristics of secondary forests in the tropics to form hypotheses about persistence of...

    Keywords: life historyconservation biologyphysiological ecologyamphibianland use changeEctothermsecondary foresttrait-based ecology

    1329

    views

    53

    downloads

    0

    comments

    0

    adaptations

    2015-Boggess-EtAl-Mathematical Modeling in Ecology - Simulating the Reintroduction of the Extinct Passenger Pigeon
    To determine under which conditions a Passenger Pigeon could survive a reintroduction into a natural habitat, we used two types of models.

    Keywords: simulationagent-based modelingallee_effectPassenger Pigeonsforest envirnomentHolling Type III functional responseBio-energeticstree distributions

    126

    views

    67

    downloads

    0

    comments

    0

    adaptations

    2018-Weber_Theers_Surmann_Ligges_Weihs-Sensitivity Analysis_of_Ordinary_Differential_Equation_Models
    This report will focus on the sensitivity analysis of ordinary differential equation (ODE) models since they can be used to model so-called Low Frequency Oscillations (LFOs).

    Keywords: sensitivityregressionparameter estimationsystemlow frequency oscillationsoscillations

    123

    views

    41

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search