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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Polyploidapalooza: Exploring the diversity and evolution of polyploid plants and animals
    This series of modules explores the complex world of polyploidy, including species formation, cell division, evolution, conservation, and economic importance. We focus on polyploidy across the...

    Keywords: Evolutionconservationnatural historyCell DivisionhybridizationPolyploidygenome duplicationallopolyploidyautopolyploidy

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    GSD QUBES Resource Draft (1)
    This QUBES module is focused towards AP Environmental studies courses. It includes hypothesis testing, transect sampling, Shannon Diversity Index, and scatter plot and bar graph creation in excel.

    Keywords: Community EcologyField researchspidersMicrosoft ExcelShannon diversity index

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    1-104A-T-InfectionRisk-ModelingScenario
    This project is designed to examine differences between the exponential and logistic growth models in biology and how to apply these models in solving epidemic questions and comparing to actual...

    Keywords: regressioninfectionCOVID19carrying capacitylogistic equationexponential model

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    2016-Wilkie-EtAl-Using ODEs to Explore Cancer-Immune Dynamics and Tumor Dormancy
    Here we present a general method using ordinary differential equations (ODEs) to model and analyze cancer-immune interactions, and in particular, immune-induced tumor dormancy.

    Keywords: cancertumor-inhibiting cytotoxic actiontumor-promoting inflammationimmune-induced tumor dormancytumor growth dynamics

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    2012-Yuan_Yuan-A coupled plankton system with instantaneous and delayed predation
    We present two simple plankton population models: one has instantaneous predation, another has delayed predation.

    Keywords: phytoplanktonbifurcationorbitsherbivorous zooplanktoneffect of fishmaturation time delay

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    1994-JM_McDill-Bjorn_Felsager-The Lighter Side of Differential Equations
    Although differential equations have many serious applications to the modeling of real-world problems, a few lighthearted problems can serve to motivate students and brighten their attitudes toward...

    Keywords: cooperationharvestingRomeo and Julietlovecannibalismovercrowding

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    1986-Cook-Witten-One-dimensional linear and logistic harvesting models
    Some of the results in the literature on simple one-dimensional, density dependent, discrete and continuous models-with and without harvesting-are reviewed.

    Keywords: logisticcontinuouspopulationlineardiscreteharvestinbg

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    Teaching Protein Structure Modeling
    New strains of microbes have been regularly discovered and brought into a laboratory for study in many different directions. When a new microbial genome is sequenced and assembled, the homologues...

    Keywords: Microbiology Educationbioinformaticsprotein structure modeling

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    2001-A_Tsoularis-Analysis_of_logistic_growth_models
    The paper presents an historical development of the logistic equation in its various forms, including Verhulst, Pearl and Reed, Gompertz, Bertalanffy, Richards, and others.

    Keywords: logisticpopulationgrowth curvelimited growthGompertzhistorylogistic equationVerhulstPearl and ReedBertalanffyRichards

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    Effects of Airport Runoff Pollution on Water Quality in Bay Area Sites Surrounding San Francisco and Oakland Airports
    Airports contribute to pollution through point source and non point source pollution, which can have a negative effect on water quality and aquatic life. The purpose of the study was...

    Keywords: water quality

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    Presence of Vegetation in Relation to Slope in Yosemite Valley, California
    Here we examine the relationship between the slope of a terrain and vegetation, measured by NDVI levels. I used satellite data from Yosemite Valley to analyze and test for statistical...

    Keywords: vegetation

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    Overview of the Genomics Education Partnership
    Poster exhibited at the National Association of Biology Teachers (NABT) 2022 conference providing an overview of the Genomics Education Partnership including its benefits to faculty, students, and...

    Keywords: course-based undergraduate research experienceGenomics Education PartnershipNABT 2022

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    BIOME 2022 Daily Spark: Accessibility
    Presentation on designing accessible STEM learning communities at the 2022 BIOME Institute.

    Keywords: BIOME 2022

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    DNA Barcoding & Biodiversity databases
    This resource pairs DNA barcoding databases with Biodiversity databases. Students collect their insect specimens in the field and use BLAST and BOLD to identify their species. They then use...
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    Science Sprints for Undergraduate Research Days
    After participating in the 2021 Science Sprint working group, I planned and executed a one-day Science Sprint focused on exploring urban ecology and social and environmental justice. Specifically,...

    Keywords: Science Sprint

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    UNVEIL-ing Framework to Summer Research Experiences
    Undergraduate research opportunities help foster a science identity and increase retention in STEM majors and transition into the STEM workforce. Moreover, these opportunities have stronger results...
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    Studying disease with Dr. Ameeta Parekh of the FDA
    Ameeta Parekh, Ph.D. is the Senior Advisor for Scientific Collaborations in the Office of Translational Sciences for the FDA. She talked to us about the FDA's mission and purpose, an overview of...

    Keywords: diseasedrugsregulatory complianceFDA

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    Science For and With the Community
    The Circle of Excellence addresses the multifaceted concerns of educational inequality in STEM experiences and outcomes. Since 2017, the program has met to provide challenging math and science...
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    Exploring the bottom of the ocean and TITANIC wreckage with David Gallo
    In honor of @WorldOceansDay , we had the privilege of talking with legendary oceanographer David Gallo for our latest Lunch With A Scientist episode. He shares astonishing footage of deep-sea...

    Keywords: Oceanographyocean exploration

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    QB@CC: An interdisciplinary network model for developing and disseminating OER to support pedagogical change
    Presentation given at the Northeast OER Summer 2022 We describe the interdisciplinary network that has been developing and sharing quantitative skills-based OER in biological sciences. The...

    Keywords: Resources @ BioQUESTqbccNortheast OER Summit

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