You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Antibiotic Resistance Genes Detection in Environmental Samples
    Our aim is to provide an authentic research experience for undergraduate students in a variety of biology courses through collaboration between a four-year university and a community college. This...

    Keywords: geneticsenvironmentmicrobiologyUndergraduateantibiotic-resistancePCRgel electrophoresisauthentic inquiry

    2039

    views

    414

    downloads

    0

    comments

    0

    adaptations

    Authentic Ecological Inquiries Using BearCam Archives
    Learning through authentic scientific inquiries is essential for understanding the nature and process of science and for developing critical thinking and communication skills. It is logistically...

    Keywords: behaviorinterspecific interactionsPeer reviewauthentic inquiryintra-specific interactions

    1640

    views

    289

    downloads

    0

    comments

    0

    adaptations

    A Hands-on Introduction to Hidden Markov Models
    In this Lesson, we describe a classroom activity that demonstrates how a Hidden Markov Model (HMM) is applied to predict a eukaryotic gene, focusing on predicting one exon-intron boundary. This HMM...

    Keywords: transcriptionexonintronsplicing

    3057

    views

    647

    downloads

    0

    comments

    0

    adaptations

    Exploration of the Human Genome by Investigation of Personalized SNPs
    Students often shy away from tedious bioinformatics approaches to exploring their genomes. However, in our expanding digital world these skills are some of the most relevant and valuable. To...

    Keywords: UCSC genome browsersingle nucleotide polymorphismGenome wide association studiesGenomic organization

    1862

    views

    839

    downloads

    0

    comments

    0

    adaptations

    You and Your Oral Microflora: Introducing non-biology majors to their “forgotten organ”
    With limited time available for laboratory activities, introductory science courses for non-science majors typically use the laboratory period to reinforce material that was previously presented...

    Keywords: bacteriamicrobiomeBLASTmicrobesDNA replicationPolymerase chain reaction (PCR)

    2186

    views

    274

    downloads

    0

    comments

    0

    adaptations

    The Science Behind Parthenogenesis: Interesting things happen when meiosis goes “wrong”
    Parthenogenetic reproduction is a fascinating, complex topic.  This article accompanies “Why Meiosis Matters: The case of the fatherless snake.” It summarizes the basic information...

    Keywords: meiosismitosissex determinationAsexual reproductionParthenogenesis

    1738

    views

    231

    downloads

    0

    comments

    0

    adaptations

    Does it pose a threat? Investigating the impact of Bt corn on monarch butterflies
    Aspiring scientists know that a hallmark of science is that experiments are repeatable and testable.  However, students do not often get opportunities to explore the replicability of...

    Keywords: ecologyCommunity EcologyBt cornGenetic modificationMonarch butterflies

    1737

    views

    413

    downloads

    0

    comments

    0

    adaptations

    Laboratory Math
    Explanations and demonstrations on how to use mathematical equations for various laboratory purposes, including those specific to SEA-PHAGES (such as phage titer calculations) and those that are...
    1134

    views

    13462

    downloads

    0

    comments

    0

    adaptations

    Grappling with Graphs: New tools for improving graphing practices among biology students
    Poster on gathering information about undergraduate biology students' graphing practices and using this information to guide teaching of graph construction. Presented at the 2021 BIOME Institute.

    Keywords: educationbiologygraphinggraphsundergraduate biology education2021 BIOMEgraph

    947

    views

    436

    downloads

    0

    comments

    0

    adaptations

    Human Dimensions in Amphibian Conservation: Addressing Threats
    This module introduces students to the theme of human dimensions in conservation and provides them with an opportunity to engage in practices related to social science research.

    Keywords: conservationhuman dimensionsamphibianssocial scienceconceptual modelstakeholder analysisopen standardsresearch proposalSPARCnet

    1605

    views

    465

    downloads

    0

    comments

    0

    adaptations

    Coyote Habituation and a Scientist Spotlight on Dr. Christopher Schell
    Dr. Christopher Schell is an ecologist who uses a variety of techniques to study mammalian carnivores in urban areas. This scientist spotlight uses graphs from his study on parental habituation to...

    Keywords: conservation ecologyanimal behaviorurban ecologyInterpreting GraphsBLACK SCIENTISTS IN STEMcoyotes

    1645

    views

    852

    downloads

    0

    comments

    0

    adaptations

    Traditional Ecological Knowledge and Natural History
    In this module, students will explore Western Science and Traditional Ecological Knowledge and review a case study of how the TEK of the Inuit provided a way of knowing and understanding the...

    Keywords: Traditional ecological knowledgeUnderstanding ScienceBowhead Whale

    1106

    views

    330

    downloads

    0

    comments

    0

    adaptations

    Life in Urban Environments: The Impact of Urbanization on Life-History Traits in Amphibian Species
    This lesson focuses on urbanization and its negative effects on species, specifically amphibians. The lesson will also provide hands-on statistical analyses and critical thinking questions to...

    Keywords: life historyRStudiofrogstwo-way ANOVAurbanizationamphibianstoads

    1028

    views

    1127

    downloads

    0

    comments

    0

    adaptations

    Backyard Beetles + Pollinators for a non-lab course on biodiversity conservation
    Backyard Beetles + Pollinators is a project to observe and evaluate plant-pollinator networks. This adaptation modifies the (adapted) modules for a non-lab course on conservation, conducted during...

    Keywords: NEONNational Ecological Observatory Network

    926

    views

    857

    downloads

    0

    comments

    0

    adaptations

    Adaptation of Plants in the Human-Altered Environment (PHAE) for a non-lab course on biodiversity conservation
    PHAE is a project to compare effects of landscape alteration intensities on plant biomass and diversity. This adaptation modifies the (adapted) modules for a non-lab course on conservation,...

    Keywords: erenNEONdiversitybiomass4DEE Frameworkecosystemsocioeconomic effects

    1026

    views

    1002

    downloads

    0

    comments

    0

    adaptations

    Exploring global reef health and human population using correlation and simple linear regression
    In this lesson, students will explore the relationship between reef cover and human disturbance. Students will manipulate a large dataset and perform normality tests, data transformations,...

    Keywords: population dynamicshumanlinear regressionconservationcorrelationRestorationcoral reefs

    1085

    views

    969

    downloads

    0

    comments

    0

    adaptations

    Calculating and Comparing Biodiversity Materials Across Sites Using NEON Herbaceous Vegetation Data - a Tutorial
    These materials are intended for use at the undergraduate level. They employ R and Excel software.
    5881

    views

    156

    downloads

    0

    comments

    0

    adaptations

    Data Management in Excel and R using National Ecological Observatory Network's (NEON) Small Mammal Data
    Students use small mammal data from the National Ecological Observatory Network to understand necessary steps of data management from data collection to data analysis by re-organising excel sheets...

    Keywords: codingR Markdowndata managementggplot2spreadsheetssmall mammals community dynamicsNEONResource TypeNational Ecological Observatory NetworkR softwaredplyr

    1451

    views

    1399

    downloads

    0

    comments

    0

    adaptations

    Reflective Writing Tools: Building Skills and Habits of Thinking in Becoming a Scientist
    Reflective writing tools are intended to help students better connect current learning experiences to prior learning, engage the role of emotion in current and future learning, and assess learning...

    Keywords: STEM educationreflective writingMentorshipambiguityindependenceperseverance

    1793

    views

    1031

    downloads

    0

    comments

    0

    adaptations

    Understanding Frameshifting
    This module contains activities to help students understand the biology of programmed translational frameshifts (PTFs) in phages, how to identify PTFs, and how to annotate them.
    856

    views

    733

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search