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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    2012-Michael_Kerckhove-From Population Dynamics to Partial Differential Equations
    This article illustrates PDE models for location-dependent carrying capacities, migrations, and the dispersion of a population.

    Keywords: population dynamicslogistic equationlocation-dependent carrying capacities

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    1-017-DiseaseSpread-ModelingScenario
    Using a grid and m&m candies, we simulate the spread of disease. Students conduct the simulation and collect data to estimate parameters (in several ways) in a differential equation model for the...
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    1-118-SolowEconomicGrowth-ModelingScenario
    Students construct and analyze the celebrated Solow-Swan model of economic growth theory. The project is divided into three sequential parts to teach students to understand, develop, and analyze a...

    Keywords: optimizationeconomicssteady stategrowthSolow-Swan modelcapitalproductionlaborGolden Rule of Economic Growth

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    6-006-ZombieGameHvZ-ModelingScenario
    Invented in 2005, Humans vs. Zombies, or HvZ, is a game of tag, predominantly played at US college campuses. In this activity, students use systems of non-linear differential equations to model...

    Keywords: zombiesSIR modelsGame

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    A talk about the impacts of Tobacco with Rachel Hendricks
    We interview researchers of all rankings! In this interview, NIH postbaccalaureate fellow Rachel Hendricks discusses her undergraduate research in Dr. Karen Bernd's lab at Davidson College and the...

    Keywords: undergraduate researchTobacco

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    BIRDD Presentation at NABT November 2021
    This publication captures parts of the BIRDD workshop at NABT in November 2021. It contains the workshop slides and links to two hands-on BIRDD activities.

    Keywords: EvolutionGalapagos

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    Lichens in Your Local Landscape
    This project uses Lichens to connect students with their local environmental air quality. Through a short lab session, students assess lichens growing on trees on their campus. They then use class...

    Keywords: NEONNational Ecological Observatory Network

    774

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    The Hidden Kingdom: Island Biogeography with Fungi
    In this activity, students will explore a dataset of fungi dispersal capabilities and colonizing success to test the predictions of island biogeography theory.

    Keywords: Island biogeographyfungi

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    How does increasing atmospheric carbon dioxide disrupt ecological systems? Results from FACE experiments across the globe.
    This module synthesizes key findings from forested CO2 enrichment experiments over the last 3 decades. Students should have a basic working knowledge of climate change, ecosystem nutrient cycles...
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    Electronic Lab Notebooks: Options for Building Data Management and Quantitative Reasoning Skills
    Presentation on Electronic Notebooks and Lab Archives given at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: 2019 QUBES/BioQUEST Summer Workshopelectronic notebookselectronic lab notebookslab archives

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    Amylase Copy Number and Diet
    An adapted module from HHMI Spreadsheet Tutorials using amylase data for students to gain data analysis and excel skills

    Keywords: Scientific ProcessStatistics and MathScientific Methodology

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    Politeness Data
    The dataset recorded properties of formal and informal speech registers in Korean.

    Keywords: linguistics

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    Java Applets for Power and Sample Size
    This is a Java application that allows you to do power and sample-size calculations for a number of standard statistical models.

    Keywords: statisticspowerstatistical powersample sizeeffect sizestatistical tests

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    Laboratory exercises on microbial growth, horizontal gene transfer, competition and evolution
    Simple laboratory exercises to reinforce student learning when performed in conjunction with NetLogo simulations.

    Keywords: microbiology

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    ABO Blood Group Frequencies
    An Excel workbook in which students can calculate blood type frequencies through different approaches (Hardy-Weinberg, quadratic formula, and the EM algorithm). The workbook shows the formulas...

    Keywords: Hardy-WeinbergExcelResources @ ESTEEMblood type frequencies

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    SEAS CURE: Exploring Coral Biology Across Scales
    Complex biological concepts (like symbiosis and coral biology) that span multiple scales and cross disciplinary boundaries are often difficult for students to understand. This complexity is...

    Keywords: microscopyAnatomySymbiosisMetabolismbleachinginvertebratedinoflagellate

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    A CURE for Salmonella: A Laboratory Course in Pathogen Microbiology and Genomics
    Rapid advances in genomics and bioinformatics, the vast amount of data generated by next-generation sequencing, and the penetration of the ‘-omics’ into many areas of biology have created a need...

    Keywords: epidemiologyresearchbioinformaticsgenomicspublic healthAntibiotic Resistant BacteriaSalmonellaDNA sequencingpathogenic bacteria

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    Unwrapping Enzyme Kinetics
    Enzyme rates and kinetics are key components used by biochemists to understand how enzymes function. However, students often find it difficult to understand how these experiments are performed and...

    Keywords: kineticsstructure-functionenzymescatalysis

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    Understanding Host-Pathogen Interactions With the Use of Galleria mellonella
    The Galleria mellonella; the larvae of the Greater Wax Moth, is a safe and effective means to study host-pathogen interactions in the undergraduate setting. The use of animal models in the teaching...

    Keywords: innate immunitybacterial pathogenesisHost-pathogen interactionsGalleria mellonellaVirulence

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    An active-learning lesson that targets student understanding of population growth in ecology
    Effective teaching and learning of population ecology requires integration of quantitative literacy skills. To facilitate student learning in population ecology and provide students with the...

    Keywords: population growthexponential growthlogistic growthpopulation ecologygrowth rateDensityAbundancecarrying capacitylinear growth

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