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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Freezer Full of Fossils v2.0
    The Long Term Evolution Experiment started by Dr. Richard Lenski provides a rich dataset to help students explore concepts of fitness, replication, and adaption.

    Keywords: graphingfitnessadaptationcompetitionSpreadsheet

    1995

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    836

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    adaptations

    CyVerse Tutorials for NEON Data Science Institute 2018
    Resource for conducting data intensive research on CyVerse
    2001

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    992

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    0

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    National Institute for STEM Evaluation and Research (NISER)
    Poster on program evaluation presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: evaluationNISERprogram evaluationSummer Workshop 2018

    1427

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    286

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    Improving Civic and Scientific Literacy through Scaffolded Thematic Classroom Research Experiences
    Poster on encouraging civic and scientific literacy presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: scientific literacyauthentic researchcivic literacySummer Workshop 2018

    1694

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    265

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    Bio+: Integration of Biology Principles and Application in Cross-Disciplinary Curricula
    Poster on two cross-disciplinary courses at Olin College presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: cross-disciplinary instructionSummer Workshop 2018

    1279

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    151

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    An evolution curriculum designed around understanding the rise and spread of drug-resistant pathogens
    Poster on teaching concepts in evolution and data science skills in an upper level Biology elective at Spelman College presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: EvolutionRdata sciencedrug resistanceSummer Workshop 2018

    1317

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    151

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    Terrestrial Trophic Cascades & Population Structure
    In this activity, students will use data from natural parks to examine trophic cascades.

    Keywords: case studyBiodiversityplantsurban ecosystemsResource Typetrophic cascadesnational parksdeforestation

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    381

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    Transpiration
    In this lab, students will examine differences between C3 and C4 plants in their transpiration rates.

    Keywords: plant physiologybotanylaboratoryResource Type

    1287

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    306

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    Seed Dispersal in Tropical Forests - implementation at a small, Primarily Undergraduate Institution
    In this activity, students use data from published studies to understand patterns of seed dispersal and apply these ideas to the design of a conservation area.

    Keywords: ecologyResources @ HHMI - BioInteractivecommunityplantsdiversityScientific Process

    1293

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    393

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    Climate of Change (Unit 5: Systems@Play) in nonmajors Environmental Science
    I implemented Unit 5 of the "Climate of Change" module into two weeks of my nonmajors Environmental Science course to cover the concepts of atmospheric science, climate change, and data...
    1120

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    249

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    Food Chain Dynamics In A Simple Ecosystem
    In this lab, students will work with a simple algae/brine shrimp environment to learn about food chains and population dynamics. It was implemented with limited alteration for an Introductory...

    Keywords: ecologyecosystemsfood chain

    1617

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    836

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    Using Systems Thinking in Introductory Biology Courses
    The Systems Thinking module (Units 1-3) was utilized in two separate introductory biology courses, General Biology II Lab and The Living Environment online course.

    Keywords: biologysystems thinkinglab activity

    1518

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    377

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    Using Climate of Change in a Non Majors Sustainability Course
    The Climate of Change module was implemented in my Introduction to Environmental Sustainability course. We concluded the semester with an in depth examination of climate change, which includes how...
    1122

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    356

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    The Carbon Cycle, Climate Change, and Feedback Loops
    I combined material from the Carbon, Climate and Energy Resources Module and the Changing Biosphere Module to help students understand climate change, the carbon cycle, and feedback loops in my...
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    323

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    Biogeography of plant-associated fungi: who lives where and why?
    This dataset of fungal communities associated with the leaves an endemic Hawaiian tree provides students opportunities to explore relationships between environmental variables and microbial...

    Keywords: small group activityinquiry-based learningbiogeographymicrobial ecology

    2025

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    1483

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    Have fish assemblages recovered from the legacy of acid rain?
    This module provides a framework for upper-level ecology students to learn about limiting factors for stream fish diversity, using data from Shenandoah National Park and gaining skills in...

    Keywords: Problem based learningdiversitycooperative learninglimiting factorsaquatic ecosystemspyramid examlab reports

    1727

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    1110

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    Using DNA Subway to Analyze Sequence Relationships
    This is a bioinformatics exercise using the DNA Subway Blue Line, a user-friendly pipeline of bioinformatics tools, to analyze a collection of mosquito DNA bar-code sequences.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignmentC1. Role of bioinformaticsC2. Computational conceptsC4. Bioinformatics toolsC5. Data retrievalC8. Data typesIncubated at NIBLSE

    2922

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    Intro to DNA Barcoding
    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 30-45 min lecture or lab class period.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignment

    1779

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    211

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    Intro to DNA Subway Blue Line
    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 1 hr 50 min lecture or lab class period.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignment

    2946

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    198

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    Geoscience Methods and Resources for K-5 Pre-Education Majors
    : Exploring Geoscience Methods was an excellent capstone experience for Elementary Education Majors. The class I used this module with was 24 students of various backgrounds and academic...

    Keywords: geneticsvideosQUBESecologyResources @ HHMI - BioInteractiveMathematical Biologycalculusjavaorganismal biologyquantitative biologybioinformaticsneurosciencegenomicscancerSecondaryyoutubemicrobiomeFaculty Mentoring NetworksalamanderCapture mark-recaptureAudience level - Introductory UG - majorsAudience level - Introductory UG - non-majorsecosystemsgenetic basis of diseasebiology of cellshuman reproductionfood chainIntroduction to Modelingrandom number generatorPost-secondaryLower DivisionPossible TasksModeling ProjectBuildCompareEvaluateexponential decayrecursionabsorptionelimination

    1615

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    2138

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