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  1. Lesson VI - The Community Science Project

    Lesson VI - The Community Science Project

    2019-11-19 21:18:39 | Teaching Materials | Contributor(s): Anne Rosenwald, Gaurav Arora, Vinayak Mathur | doi:10.25334/MN0K-XB56

    Genome Solver's Community Science Project was developed as a way to use the skills taught in the previous lessons. We're asking members of the community to provide instances of potential phage genes embedded in bacterial genomes.

  2. Spectral Seismology Module

    Spectral Seismology Module

    2019-11-19 17:54:26 | Teaching Materials | Contributor(s): D. S. Soule, M. Weirathmuller, G. Kroeger, R. D. Gougis | doi:10.25334/EZ9F-N902

    Based on a conceptual presentation of waveforms and filters

  3. Water Quality Module

    Water Quality Module

    2019-11-19 17:49:55 | Teaching Materials | Contributor(s): C. A. Gibson, D. N. Castendyk | doi:10.25334/WCA6-BS39

    Students utilize real-time nitrate data from the US Geological Survey to statistically evaluate water quality impacts and to identify their causes

  4. Climate Change Module

    Climate Change Module

    2019-11-19 17:46:42 | Teaching Materials | Contributor(s): Catherine O'Reilly, D. C. Richardson, R. D. Gougis | doi:10.25334/Y7B6-5070

    Students explore how climate is changing from the recent record

  5. Lake Mixing Module

    Lake Mixing Module

    2019-11-19 17:43:24 | Teaching Materials | Contributor(s): Cayelan Carey, Jen Klug, R. L. Fuller | doi:10.25334/QBBS-4V94

    Students explore spatial and temporal patterns of lake mixing using high-frequency temperature data from lakes around the world.

  6. Soil Respiration Module

    Soil Respiration Module

    2019-11-19 17:37:52 | Teaching Materials | Contributor(s): L. E. Nave, N E Bader, Jen Klug | doi:10.25334/Q5KZ-8523

    Soils hold more carbon (C) than any other component of the terrestrial biosphere!

  7. Stream Discharge Module

    Stream Discharge Module

    2019-11-19 17:33:39 | Teaching Materials | Contributor(s): N E Bader, T. Meixner, C. A. Gibson, Catherine O'Reilly, D. N. Castendyk | doi:10.25334/V96B-NM56

    Stream discharge is a fundamental measure of water supply in stream systems. Low discharge may cause problems with water supply and fish passage, while high discharge may mean flooding. In this module, students explore real-time stream discharge...

  8. Cross-Scale Interactions

    Cross-Scale Interactions

    2019-11-19 17:23:44 | Teaching Materials | Contributor(s): Cayelan Carey, Kaitlin Farrell | doi:10.25334/VP7B-8A87

    Students explore new modeling and computing tools while learning fundamental concepts about how lake phytoplankton blooms occur through cross-scale interactions.

  9. Climate Change Effects on Lake Temperatures

    Climate Change Effects on Lake Temperatures

    2019-11-19 17:19:48 | Teaching Materials | Contributor(s): Cayelan Carey, S Aditya, K. Subratie, R. Figueiredo, Kaitlin Farrell | doi:10.25334/RF06-B078

    Students explore new modeling and computing tools while learning fundamental concepts about how climate change will affect lakes

  10. Teaching Population Dynamics with Data and HHMI BioInteractive

    Teaching Population Dynamics with Data and HHMI BioInteractive

    2019-11-16 22:04:49 | Teaching Materials | Contributor(s): Abby Kula, Kristine Grayson | doi:10.25334/DRTS-CZ24

    Presented at NABT 2019, we demonstrate how the Population Dynamics Click & Learn resource can be customized for any organism - using the Lionfish invasion as an example

  11. Population Demography in Swirl

    Population Demography in Swirl

    2019-11-06 20:53:02 | Teaching Materials | Contributor(s): Emily Weigel | doi:10.25334/H2QK-FD50

    The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.

  12. Earth Analytics in Python Course

    Earth Analytics in Python Course

    2019-11-01 14:37:29 | Teaching Materials | Contributor(s): Leah Wasser, Jenny Palomino, Chris Holdgraf | doi:10.25334/SH4R-QH25

    Earth analytics is an intermediate, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of heterogeneous ‘big scientific data’.

  13. Neochromosomes: Creating transcriptional units with yeast Golden Gate assembly

    Neochromosomes: Creating transcriptional units with yeast Golden Gate assembly

    2019-10-29 14:18:59 | Teaching Materials | Contributor(s): Eric Cooper | doi:10.25334/3J95-S075

    This resource is a series of protocols using the yeast Golden Gate (yGG) method as developed by Neta Agmon and Leslie Mitchell in Jef Boeke’s lab to assemble a functional yeast gene with protein-coding and regulatory sequences.

  14. A Curious Display

    A Curious Display

    2019-10-28 16:56:17 | Teaching Materials | Contributor(s): Margaret Waterman, Brandon Call, Sandi Connelly, Kristin Jenkins, Sam Catherine Johnston, Vedham Karpakakunjaram, Viet Le, Hayley Orndorf, Melissa Skyer, Barbara Spiecker | doi:10.25334/979W-CY69

    Case study on genetically modified organisms

  15. Intro videos and terminology for GMOs, Transcription, Translation

    Intro videos and terminology for GMOs, Transcription, Translation

    2019-10-28 16:35:24 | Teaching Materials | Contributor(s): Sandi Connelly | doi:10.25334/CJZQ-3K68

    Compiled resources around GMOs and protein production including vocabulary, animations, videos, and games

  16. Gelin’: Gel Electrophoresis Simulation

    Gelin’: Gel Electrophoresis Simulation

    2019-10-24 17:57:29 | Teaching Materials | Contributor(s): Beyond Benign | doi:10.25334/H121-N731

    Students will understand how DNA is separated into a fingerprint by using a chromatography activity to simulate gel electrophoresis.

  17. Complete Set of Lessons

    Complete Set of Lessons

    2019-10-23 15:16:23 | Teaching Materials | Contributor(s): Anne Rosenwald, Gaurav Arora, Vinayak Mathur | doi:10.25334/E4GQ-2S85

    The Genome Solver Project began as a way to teach faculty some basic skills in bioinformatics - no coding or scripting. These Lessons also work well in the undergraduate classroom, culminating with an authentic community research project.

  18. Lesson III - Annotation

    Lesson III - Annotation

    2019-10-23 14:50:05 | Teaching Materials | Contributor(s): Gaurav Arora | doi:10.25334/9MR2-DX11

    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all the A's, C's, T's, and G's.

  19. Lesson III - Annotation

    Lesson III - Annotation

    2019-10-23 14:49:24 | Teaching Materials | Contributor(s): Gaurav Arora | doi:10.25334/2XEK-ME57

    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all the A's, C's, T's, and G's.

  20. Lesson V - Phylogenetics

    Lesson V - Phylogenetics

    2019-10-22 21:27:41 | Teaching Materials | Contributor(s): Anne Rosenwald, Gaurav Arora, Vinayak Mathur | doi:10.25334/HBAR-5X64

    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson V is an introduction to Phylogenetics.