R Shiny App Example

09 May 2018 | Software (On-site) | Contributor(s): Drew LaMar

This is a simple example used to demonstrate what is needed to host your R Shiny app on QUBESHub.

R Shiny Basics

17 Aug 2015 | Teaching & Reference Material | Contributor(s): Claire K. Lunch, Christine M. Laney

A nice introduction to building apps with R Shiny. Written by the folks at NEON (National Ecological Observatory Network).

Radiant

16 Sep 2015 | Software (On-site)

Business analytics using R and Shiny.

Radiant Lite

24 Jul 2019 | Software (On-site) | Contributor(s): Drew LaMar

Stripped down version of Radiant on QUBES

Rstudio cheatsheets

17 Aug 2015 | Teaching & Reference Material

This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/839Cheatsheets are quickstart guides to using some of the most popular packages and features of Rstudio. This link will direct you to the following cheatsheets:Shiny...

RStudio IDE for R

22 Jan 2015 | Software (On-site)

RStudio is a GUI for R, the statistical programming language.

Sealing the Deal The Grey Seal Problem in the U.S. Northeast

16 Jan 2015 | Teaching & Reference Material | Contributor(s): Matthew S. Kaufman

"This case study uses a PowerPoint-driven approach combined with role-playing to explore issues surrounding the grey seal population off the coast of New England, specifically Chatham, Massachusetts. After gathering information, the students take the part of Chatham City council members and...

SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations

16 Oct 2015 | Teaching & Reference Material | Contributor(s): Brian Winkel

SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations  is about teaching differential equations using modeling and technology upfront and throughout the learning process. You can learn more at our dynamic website, www.simiode.org, where we...

Small-world models

02 Jun 2015 | Teaching & Reference Material | Contributor(s): Winfried Just, Hannah Lea Callender

Small-world networks are classes of networks that have both the small-world property and exhibit strong clustering. Two constructions of such networks are implemented in IONTW. Here we study, both theoretically and with simulation experiments, the structure of these networks and how it influences...

Statistical Exploration of Climate Data

11 Mar 2015 | Teaching & Reference Material | Contributor(s): Tamra Carpenter, Robert Vanderbei, Jon Kettenring

This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/900Teacher version       Student versionThis module is appropriate for introductory statistics classes.Supporting files: Module figures for...

Statistical Power for One-Sample t-Test

18 May 2015 | Software (On-site) | Contributor(s): Drew LaMar

Interactive visualization of statistical power for a one-sample t-test.

statsTeachR

23 Jan 2015 | Teaching & Reference Material | Contributor(s): Nicholas Reich, Andrea Foulkes, Harrel Blatt, Eric Cohen, Gregory Matthews

This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/781From the project website:What is statsTeachR?statsTeachR is an open-access, online repository of modular lesson plans, a.k.a. "modules", for teaching...

Staying Alive: Extinction Risk: Introduction to Extinction and Extinction Bias

08 Jul 2015 | Teaching & Reference Material | Contributor(s): Samantha Price, Peggy Schaeffer, Anna Thanukos, Samantha Swauger

This resource has been updated - find the current version here: https://qubeshub.org/publications/275Data used in this activity are derived from: Price, S.A., and Gittleman J.L. 2007. Hunting to extinction: biology and regional economy influence extinction risk and the impact of hunting in...

Survivorship in the Natural World

09 Jul 2015 | Teaching & Reference Material | Contributor(s): Anne M. Bronikowski, Jeanne Altmann, Diane K. Brockman, Marina Cords, Linda M. Fedigan, Anne Pusey, Tara Stoinski, William F. Morris, Karen B. Strier, Susan C. Alberts, Samantha Swauger

This resource has been updated - find the current version here: https://qubeshub.org/publications/273Data used in this activity are derived from: Bronikowski A.M., Altmann J., Brockman D.K., Cords, M., Fedigan, L.M., Pusey, A., Stoinski, T., Morris, W.F., Strier, K.B., Alberts, S.C. (2011)...

Swirl

10 Jul 2020 | Software (On-site)

Swirl: Learn R, in R

Taking a Second Look: Investigating Biology with Visual Datasets

13 Mar 2015 | Teaching & Reference Material | Contributor(s): Ethel Stanley

This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/831An article exploring the use of visual datasets as an educational aid for biology students. Article abstract:  Have you considered the use of biological...

Teaching Exponential and Logistic Growth in a Variety of Classroom and Laboratory Settings

03 Aug 2015 | Teaching & Reference Material | Contributor(s): Barry Aronhime, Bret D. Elderd, Carol Wicks, Margaret McMichael, Elizabeth Eich

This resource has been updated - find the current version here: https://qubeshub.org/publications/268Ecology and conservation biology contain numerous examples of populations growing without bounds or shrinking towards extinction. For these populations, the change in the number of...

The Evolution (and Coevolution) of Flowering Plants

02 Dec 2016 | Teaching & Reference Material | Contributor(s): Anna Monfils, Debra Linton, Libby Ellwood, Molly Phillips

This resource has been updated - find the current version here: https://qubeshub.org/publications/277In this laboratory exercise, students will explore the diversity of flower and fruit adaptations that have evolved to accomplish pollination and seed dispersal and investigate the...

The Evolution of Color Vision in Monkeys: From Nucleotides to Ecology

16 Jun 2015 | Teaching & Reference Material | Contributor(s): Merle Heidemann, Peter J.T. White, Jim Smith

This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/843This case study examines the evolution color vision in Old World and New World monkeys from multiple biological perspectives. This integrative approach employs both...

The friendship paradox

10 May 2015 | Teaching & Reference Material | Contributor(s): Winfried Just, Hannah Lea Callender, Drew LaMar

In this module we introduce the so-called friendship paradox and illustrate how it affects disease transmission on networks that exhibit this phenomenon.You also need to download the input file degreesFP.txt that will be used in this module.Level: Advanced undergraduate and graduate...