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  1. Disease Spread

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    22 Nov 2015 | Teaching & Reference Material | Contributor(s): Brian Winkel

    An activity in which students model the spread of disease using one differential equation. 

  2. Yeast Cell Growth

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    19 Nov 2015 | Teaching & Reference Material | Contributor(s): Claudia Neuhauser

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/755Excel Workbook on lab data for yeast growth experiments provides a series of stepwise tasks for data analysis.

  3. Confidence Intervals Tutorial

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    19 Nov 2015 | Teaching & Reference Material | Contributor(s): Claudia Neuhauser, David Phillip Schladt

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/754This Excel mini-tutorial introduces the calculation and application of confidence intervals.

  4. Course materials for computational genomics using R

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    19 Nov 2015 | Teaching & Reference Material | Contributor(s): Hong Qin

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/907The R code and data are deposited at Github: https://github.com/hongqin/RCompBio 

  5. Course materials for computational genomics using R

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    19 Nov 2015 | Teaching & Reference Material | Contributor(s): Hong Qin

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/907The R code and data are deposited at Github: https://github.com/hongqin/RCompBio 

  6. SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations

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    20 Oct 2015 | Teaching & Reference Material | Contributor(s): Brian Winkel

    SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations  is about teaching differential equations using modeling and technology upfront and throughout the learning process. You can learn more at our dynamic website, www.simiode.org, where we...

  7. Data Analysis for the Life Sciences

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    25 Sep 2015 | Teaching & Reference Material | Contributor(s): Rafael A Irizarry, Michael I Love

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/841An online stats book written completely in R!From the authors:"Data analysis is now part of practically every research project in the life sciences. In this...

  8. Performing a Population Viability Analysis from Data Students Collect on a Local Plant

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    23 Sep 2015 | Teaching & Reference Material | Contributor(s): Noah Chamey, Sydne Record

    This resource has been updated - find the current version here: https://qubeshub.org/publications/264During two lab periods, students collect demographic data on perennial plants and then use these data in a matrix model to perform population viability analyses. During the first lab,...

  9. EvolSeq

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    14 Sep 2015 | Teaching & Reference Material | Contributor(s): Tony Weisstein, John R Jungck

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/776This worksheet simulates the molecular evolution of DNA sequences. The program begins with a single (random) sequence, then follows that sequence through time as it...

  10. Luria-Delbruck

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    14 Sep 2015 | Teaching & Reference Material | Contributor(s): Tony Weisstein, John R Jungck, Doug Green

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/777These two workbooks model the evolution of phage resistance in a bacterial population under two alternative hypotheses. Under the hypothesis of acquired immunity, mutation...

  11. Michaelis-Menten Enzyme Kinetics

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    14 Sep 2015 | Teaching & Reference Material | Contributor(s): Tony Weisstein

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/778In this simulation equations used in enzyme kinetics (Michaelis-Menten, Eadie-Hofstee, Dixon, and Lineweaver-Burk) are modeled under various conditions. The equations are...

  12. R Commander

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    04 Sep 2015 | Software (On-site) | Contributor(s): Drew LaMar

    R provides a powerful and comprehensive system for analysing data and when used in conjunction with the R-commander (a graphical user interface, commonly known as Rcmdr) it also provides one that is easy and intuitive to use.

  13. R Reference Card

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    02 Sep 2015 | Teaching & Reference Material | Contributor(s): Tom Short

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/840by Tom Short, EPRI PEAC, tshort@epri-peac.com 2004-11-07Granted to the public domain. See www.Rpad.org for the source and latest version. Includes material from R...

  14. E. coli Citrate Use

    0.0 out of 5 stars 

    24 Aug 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/publications/357Bacteria are excellent model organisms for studying evolution.  They are easy to grow, maintain, and handle under very controlled conditions.  Even more importantly for evolution...

  15. 3D FractaL-Tree

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    24 Aug 2015 | Teaching & Reference Material | Contributor(s): John R Jungck, Jennifer A Spangenberg, Noppadon Khiripet, Rawin Viruchpinta, Jutarat Maneewattanapluk

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/775Artistid Lindemayer (1975, 1989, 1990) invented a mathematics based on graph grammar rewriting systems to describe iteratively branching structures; these were named in...

  16. Ferns are Everywhere

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    24 Aug 2015 | Teaching & Reference Material | Contributor(s): Claudia Neuhauser

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/753Using spatial fern population data in hypothesis testing

  17. Environmental Justice and Fresh Water

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    24 Aug 2015 | Teaching & Reference Material | Contributor(s): Adriana Perez, Jill Schneiderman, Meg Stewart, Joshua Villalobos

    This resource has been updated - find the current version here: https://qubeshub.org/publications/276This module enables students to identify the freshwater components of the hydrologic cycle and connect them to the basic need of all human beings for equal access to clean freshwater. 

  18. Interactions Between Water, Earth's Surface, and Human Activity

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    24 Aug 2015 | Teaching & Reference Material | Contributor(s): Sue Debari, Kyle Gray, Julie Monet

    This resource has been updated - find the current version here: https://qubeshub.org/publications/288This module focuses on water and its importance to humans using Google Earth images of stream profiles in different climates, and with real river flooding data sets.  

  19. Climate of Change: Interactions and Feedbacks between Water, Air and Ice

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    24 Aug 2015 | Teaching & Reference Material | Contributor(s): Cindy Shellito, Becca Walker, Cynthia Fadem

    This resource has been updated - find the current version here: https://qubeshub.org/publications/289In this module students explore short-term climate variability resulting from atmosphere-ocean-ice interactions.

  20. Natural Hazards and Risks

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    24 Aug 2015 | Teaching & Reference Material | Contributor(s): Lisa Gilbert, Josh Galster, Joan Ramage

    This resource has been updated - find the current version here: http://qubeshub.org/publications/290This module explores how hurricanes connect the ocean-atmosphere-terrestrial systems and society by having students evaluate how hurricane hazards and risks have changed with coastal development.

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