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Tags: Article

All Categories (1-20 of 66)

  1. 50 years of Data Science

    23 Feb 2016 | | Contributor(s):: David Donoho

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/912More than 50 years ago, John Tukey called for a reformation of academic statistics. In ‘The Future of Data Analysis’, he pointed to the existence of an as-yet...

  2. 50 Years of Data Science

    30 Oct 2018 | Teaching Materials | Contributor(s):

    By David Donoho

    Stanford University

    This paper reviews some ingredients of the current “Data Science moment”, including recentcommentary about data science in the popular media, and about how/whether Data Science isreally different...

    https://qubeshub.org/publications/912/?v=1

  3. A Critical Guide to the PDB

    05 Dec 2020 | Teaching Materials | Contributor(s):

    By Teresa Attwood1, GOBLET Foundation

    The University of Manchester, Manchester, UK

    This Critical Guide in the Introduction to Bioinformatics series provides a brief outline of the Protein Data Bank – the PDB – the world’s primary repository of biological macromolecular structures.

    https://qubeshub.org/publications/2174/?v=1

  4. A Critical Guide to the UniProtKB Flat-file Format

    05 Dec 2020 | Teaching Materials | Contributor(s):

    By Teresa Attwood1, GOBLET Foundation

    The University of Manchester, Manchester, UK

    This Critical Guide briefly presents the need for biological databases and for a standard format for storing and organising biological data.

    https://qubeshub.org/publications/2175/?v=1

  5. A Critical Guide to Unix

    04 Dec 2020 | Teaching Materials | Contributor(s):

    By Teresa Attwood1, GOBLET Foundation2

    1. The University of Manchester, Manchester, UK 2. Global Organisation for Bioinformatics Learning, Education & Training

    This Critical Guide in the Introduction to Bioinformatics series briefly introduces the Unix Operating System, and provides a subset of some of the most helpful and commonly used commands....

    https://qubeshub.org/publications/2162/?v=1

  6. A Little Off The Top: The Effects Of Mountiantop Removal Mining On Salamanders

    11 May 2021 | Teaching Materials | Contributor(s):

    By Brian Tyler Dagliano

    This lesson will provide an explanation of mountaintop removal mining, and potential harms associated with it. Then the lesson will move into a statistical analysis of salamanders living in streams...

    https://qubeshub.org/publications/2346/?v=1

  7. A Quick Guide to Teaching R Programming to Computational Biology Students

    03 Jun 2015 | | Contributor(s):: Stephen Eglen

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/838An introduction from an experienced educator in teaching R to computational biology graduate students. Contains information that is relevant for the undergraduate classroom...

  8. A Quick Guide to Teaching R Programming to Computational Biology Students

    22 Oct 2018 | Teaching Materials | Contributor(s):

    By Stephen Elgen

    University of Cambridge

    An introduction from an experienced educator in teaching R to computational biology graduate students.

    https://qubeshub.org/publications/838/?v=1

  9. A Tough Choice in Watershed Management

    08 May 2020 | Teaching Materials | Contributor(s):

    By Ann E Russell

    Iowa State University

    In this Team-based activity, students work in teams, playing the role of natural resource managers who must decide in which region to invest limited funding for nutrient reduction in streams....

    https://qubeshub.org/publications/1826/?v=1

  10. Advancing population ecology with integral projection models: a practical guide

    23 Jan 2015 | | Contributor(s):: Cory Merow, Johan Dahlgren, Jessica Metcalf, Dylan Childs, Margaret Evans, Eelke Jongejans, Sydne Record, Mark Rees, Roberto Salguero-Gómez, Sean McMahon

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/824Integral projection models (IPMs) use information on how an individual's state influences its vital rates – survival, growth and reproduction – to...

  11. Advancing population ecology with integral projection models: a practical guide

    20 Oct 2018 | Teaching Materials | Contributor(s):

    By Cory Merow1, Johan Dahlgren2, Jessica Metcalf3, Dylan Childs4, Margaret Evans5, Eelke Jongejans6, Sydne Record7, Mark Rees4, Roberto Salguero-Gómez8, Sean McMahon9

    1. Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA 2. Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden 3. Department of Zoology, Oxford University, Oxford, UK 4. Department of Animal and Plant Sciences, University of Sheffield, Sheffield, UK 5. Laboratory of Tree-Ring Research and Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA 6. Department of Animal Ecology and Ecophysiology, Institute for Water and Wetland Research, Radboud University Nijmegen, Nijmegen, The Netherlands 7. Harvard University, Harvard Forest, Petersham, MA, USA 8. Centre for Biodiversity and Conservation Science, University of Queensland, St Lucia, Qld, Australia 9. Smithsonian Environmental Research Center, Edgewater, MD, Edgewater, MD, USA

    Integral projection models (IPMs) use information on how an individual's state influences its vital rates – survival, growth and reproduction – to make population projections using regression...

    https://qubeshub.org/publications/824/?v=1

  12. Assessment of Science Inquiry

    19 Jun 2015 | | Contributor(s):: Sabra Lee, George E. Hein

    This resource has been updated - find the current version here: https://qubeshub.org/publications/313Different types of classroom assessment can give teachers different kinds of evaluation information. This chapter surveys the assessment methods available to teachers, and talks about the...

  13. Assessment of Science Inquiry

    17 Jan 2018 | Teaching Materials | Contributor(s):

    By Sabra Lee, George Hein

    Resource from the 2015 BioQUEST Summer Workshop

    https://qubeshub.org/publications/313/?v=1

  14. Avida-ED User Manual

    07 Jun 2015 | | Contributor(s):: Diane Blackwood

    Basic User manual to use Avida-ED

  15. Avida-ED User Manual

    26 Oct 2018 | Teaching Materials | Contributor(s):

    By Diane Blackwood

    Michigan State University

    Basic User manual to use Avida-ED

    https://qubeshub.org/publications/879/?v=1

  16. BioNumbers—the database of key numbers in molecular and cell biology

    03 Oct 2015 | | Contributor(s):: Ron Milo, Paul Jorgensen, Uri Moran, Griffin Weber, Michael Springer

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/821BioNumbers (http://www.bionumbers.hms.harvard.edu) is a database of key numbers in molecular and cell biology—the quantitative properties of biological systems of...

  17. Breeding synchrony in colonial birds: from local stress to global harmony

    02 Aug 2015 | | Contributor(s):: Roger Jovani, Volker Grimm

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/871This is a supplemental resource for Agent-based and Individual-based Modeling: a practical introduction by Railsback and Grimm (2012). This is a reprint from...

  18. Breeding synchrony in colonial birds: from local stress to global harmony

    25 Oct 2018 | Teaching Materials | Contributor(s):

    By Volker Grimm, Roger Jovani1

    Helmholtz Center for Environmental Research

    This is a supplemental resource for ABM

    https://qubeshub.org/publications/871/?v=1

  19. Building Community-Based Approaches to Systemic Reform in Mathematical Biology Education

    03 Sep 2020 | Teaching Materials | Contributor(s):

    By Olcay Akman1, Carrie Diaz Eaton2, Dan Hrozencik3, Kristin Jenkins4, Kaci Thompson5

    1. Illinois State University 2. Bates College and QUBES 3. Chicago State University 4. BioQUEST 5. University of Maryland

    This is an open access article from Bulletins in Math Bio.

    https://qubeshub.org/publications/2095/?v=1

  20. Caribbean coral reef structure and biodiversity - Comparing boosted regression tree & multiple regression approaches

    29 May 2020 | Teaching Materials | Contributor(s):

    By Eric Womack

    Virginia Commonwealth University

    Creating and comparing boosted regression tree models to multiple regression models.

    https://qubeshub.org/publications/1870/?v=1