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Tags: genomics

All Categories (1-20 of 55)

  1. William M Maza

  2. Rachael M St. Jacques

  3. Intro to Command Line Coding Genomics Analysis

    28 Feb 2019 | Teaching Materials | Contributor(s):

    By Rachael St. Jacques1, Max Maza1, Ray A Enke1

    James Madison University

    This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.

  4. Mao-Lun Weng

  5. Making toast: Using analogies to explore concepts in bioinformatics

    04 Jan 2019 | Teaching Materials | Contributor(s):

    By Kate L. Hertweck

    University of Texas at Tyler

    Module using analogies to introduce students to genomics

  6. A Hands-on Introduction to Hidden Markov Models

    04 Jan 2019 | Teaching Materials | Contributor(s):

    By Tony Weisstein1, Elena Gracheva2, Zane Goodwin2, Zongtai Qi2, Wilson Leung2, Christopher D. Shaffer2, Sarah C.R. Elgin2

    1. Truman State University 2. Washington University in St. Louis

    A lesson in which students will understand the basic structure of an HMM, the types of data used in ab initio gene prediction, and its consequent limitations.

  7. Anne M Brown

  8. Vince Buonaccorsi

  9. Ken Saville

  10. Peter Sudmant

  11. christos noutsos

  12. Cintia Fabiana Hongay

  13. Catherine Reinke

  14. Karobi Moitra

    Dr. Karobi Moitra is a Clare Boothe Luce Associate Professor of Molecular Biology at Trinity Washington University in Washington DC and a former Assistant Provost for the Sciences at Trinity. She...

  15. Ahmed Hasan

  16. James S. Santangelo

  17. Bioimage Informatics Activity

    26 Jul 2018 | Teaching Materials | Contributor(s):

    By David Julian

    Univ of Florida

    Students use basic bioimage informatics techniques to acquire quantitative data from images of cultured cells and test a hypothesis about the effect of a genetic mutation on cellular phenotypes

  18. Drug screening and cancer resistance: EGFR Activity

    25 Jul 2018 | Teaching Materials | Contributor(s):

    By Holly Basta

    Rock Mountain College

    This activity explores a specific gene (egfr) and its role in cancer. EGFR was introduced with the Gene Card Activities, researched throughout the semester, and then authentic image data of...

  19. Videos on Java for courses at University of Tennessee

    16 Apr 2018 | Teaching Materials | Contributor(s):

    By Hong Qin

    Spelman College

    Eight videos developed by Hong Qin about using Java at the University of Tennessee Chattanooga

  20. Java array and random number generator, hints

    16 Apr 2018 | Teaching Materials | Contributor(s):

    By Hong Qin

    Spelman College

    Java, UTC, Fall 2017