Find information on common questions and issues.
Check on the status of your correspondences with members of the QUBES team.
Enhance students’ opportunities to contribute and benefit from the intellectual community of the classroom, use course structures to promote engagement in and out of class, enhance cooperation and reduce competition, emphasize the relevance of coursework to real life, support students’ sense of autonomy to increase interest and enjoyment and possibly decrease anxiety measures.
Spatial Analysis with QGIS
13 Oct 2021 | Teaching Materials | Contributor(s):
By Ryan Kerney1, Timothy Whitfeld2
1. Gettysburg College 2. Bell Museum, University of Minnesota
Map specimen data points using QGIS, connect them to form a polygon using the Concave Hull plugin, and calculate the range of a species to examine how it changes over time.
A Changing Climate in the Hawaiian Wet Forest: In-Person and Virtual Curriculum for Field Courses at Puʻu Makaʻala NAR
11 Oct 2021 | Teaching Materials | Contributor(s):
By Teaching Change
Curriculum for Puʻu Makaʻala Huakaʻi with the National Ecological Observatory Network (NEON), developed by Teaching Change. This module was created to guide Teaching Change Field Courses at Puʻu...
Mapping Specimen Occurrence Data in QGIS
24 Sep 2021 | Teaching Materials | Contributor(s):
By Cecily Bronson
Portland State University
Use digitized natural history collection occurrence data from the Global Biodiversity Information Facility (GBIF) to map the distribution of the beaver in the state of Oregon from 1800-2020 using QGIS
Reading and Discussing Popular Media to Increase SEA-PHAGES Student Engagement
16 Sep 2021 | Teaching Materials | Contributor(s):
By Allison A Johnson, Daniel Eric Westholm, Nathan s Reyna1
Ouachita Baptist Univeristy
This module introduces ways for students to connect their SEA-PHAGES work and real life medical trials with events presented in Arrowsmith, Sinclair Lewis’s 1925 Pulitzer prize winning novel on...
Phage Comparative Genomics Lab Manual
30 Aug 2021 | Teaching Materials | Contributor(s):
By Andrew Kapinos1, Canela Torres2, Amanda Freise2
1. University of California, San Diego 2. University of California, Los Angeles
A lab manual containing detailed instructions for several bioinformatics tools (dot plots, Phamerator maps, phylogenetic trees, and gene content similarity), all of which enable students to perform...
Applying phylogenetic tree building in MEGA X to forensic applications for identifying unknown specimens
By Nicholas Lorusso1, Denise Gemmellaro2
1. University of North Texas at Dallas 2. Kean University
This exercise is designed to guide a learner through the construction of phylogenetic trees as a means of addressing research questions in forensic science such as the identification of previously...
STEM Inclusive Teaching Practices Webinar Series: Fixed vs Growth Mindset and Why the Biggest Challenge May be Faculty (Episode Seven)
By Brett Woods
High Point University
This webinar will explore how faculty can teach with a growth mindset and identify some potential areas of fixed mindset that might prove to be obstacles for many students.
Collections Education Coffee Break Series: Anne Basham from LepNet and SCAN on Vimeo
19 Aug 2021 | Teaching Materials | Contributor(s):
By Anne Basham
Anne Basham (Founder ExplorMor Labs LLC/Co-Founder Bon-Earth, LeptNet and SCAN) Presenting on Natural history collections that connect marginalized elders with memory and the natural world. ...
09 Aug 2021 | Teaching Materials | Contributor(s):
By Andrea R. Beyer1, Pamela Lucas Connerly2, Christy Fillman3, Nick T. Peters4
1. Virginia State University 2. Indiana University Southeast 3. University of Colorado, Boulder 4. Iowa State University
Explanations and demonstrations on how to use mathematical equations for various laboratory purposes, including those specific to SEA-PHAGES (such as phage titer calculations) and those that are...
Assessing Socioeconomic Trends in Tree Cover and Human Health in Urban Environments
02 Aug 2021 | Teaching Materials | Contributor(s):
By Tamara Basham
Collin County Commuity College District
In this exercise, students use a combination of publicly available data and tree cover data that they generate using iTree Canopy to test whether tree cover is equitably distributed within the city...
Exploring Health Inequities and Redlining
30 Jul 2021 | Teaching Materials | Contributor(s):
By Mary Mulcahy
University of Pittsburgh at Bradford
For this assignment, students will investigate relationships between historic redlining data and modern statistics of human health.
Scientist Spotlights and Data Nuggets Workshop Materials (BIOME 2021)
29 Jul 2021 | Teaching Materials | Contributor(s):
By Jessica Ashley Allen1, Jennifer Apple2, Karen Groh3, Elizabeth Hamman4, Pratima Jindal5, Pat Marsteller6, Heather Olins7, Darlene Panvini8, Rachel Pigg9, Gustavo Requena Santos10, Merrie Renee Richardson11, Sheela Vemu12, Jennifer Wade13, Suann Yang14
1. Columbia College 2. SUNY Geneseo 3. Good Samaritan College 4. St Mary's College of Maryland 5. Waubonsee Community College 6. Emory University 7. Boston College 8. Belmont University 9. University of Louisville 10. Science Yourself 11. Southcentral Kentucky Community & Technical College 12. Waubonsee Community College - Tenure Track and Northern Illinois University 13. Massachusetts College of Pharmacy and Health Sciences 14. State University of New York College at Geneseo
Materials and resources for the "Scientist Spotlights and Data Nuggets Workshop," presented at the 2021 Biology and Mathematics Educators (BIOME) Institute.
Using Nanoparticles to Treat Cancer Scientist Spotlight
26 Jul 2021 | Teaching Materials | Contributor(s):
By Jennifer Wade1, Hyeyoun Chang2
1. Massachusetts College of Pharmacy and Health Sciences 2. Dana Farber Cancer Institute
Students use published scientific data to determine which types of nanoparticles would be best to use to deliver cytotoxic drugs directly to cancer cells. Then they learn about the scientist who...
Examining Medical and Scientific Racism Using the Story of Henrietta Lacks
22 Jul 2021 | Teaching Materials | Contributor(s):
By Melissa Haswell
This is a semester-long project in which students read and discuss the story of Henrietta Lacks from multiple ethical perspectives. This project was developed for an undergraduate science ethics...
Urban stream invaders: a scientist spotlight featuring Dr. Piatã Santana Marques
15 Jul 2021 | Teaching Materials | Contributor(s):
By Jennifer Apple
Students read and interpret data from a study which addresses how urbanization affects the invasive attributes of a non-native species. They also reflect on the identity of the lead researcher and...
Using Bioinformatics Activities to understand the Past and Present of SARS-CoV2
30 Jun 2021 | Teaching Materials | Contributor(s):
By Gaurav Arora
We have designed a Bioinformatics activity that uses tools to identify the origins and mutations in the novel SARS-CoV2 strains.
Critical inquiry for inclusive teaching of statistics
28 Jun 2021 | Teaching Materials | Contributor(s):
By Carrie Diaz Eaton
Professional development workshop slides to help curate conversations in teaching statistics with a critical inquiry lens.
Choosing healthy data for healthy relationships: how to use 5-point summaries, box and whisker plots, and correlation to understand global health trends.
21 Jun 2021 | Teaching Materials | Contributor(s):
By Andrea Huntoon1, John Doudna2, Pallavi Bhale3, Thalita Abrahão4, Alys Hugo5, Jennifer Lyon Adler6
1. Fox Valley Technical College 2. Lansing Community College 3. Montgomery College 4. Georgia State University Perimeter College 5. Everett Community College 6. Maysville Community and Technical College
This module utilizes a user-friendly database exploring data selection, box-and-whisker plot, and correlation analysis. It also guides students on how to make a poster of their data and conclusions.
Final Project for Calling Bull
11 Jun 2021 | Teaching Materials | Contributor(s):
This is the final project for the calling bull course & it is to find 3 pieces of misinformation/BS and debunk them. They have to re-do at least one visualization, use R in at least one debunking,...
Happy Blue Baby
09 Jun 2021 | Teaching Materials | Contributor(s):
By Didem Vardar-Ulu
Boston University, Chemistry Department
This case, about a specific mutant of hemoglobin, focuses on visualizing and understanding the molecular basis of why an infant turned blue soon after birth and how the cyanosis resolved on its own...