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27 Jun 2015 | | Contributor(s):: Drew LaMar
Simulates basic models in theoretical ecology, as well as three models of bacteria/bacteriophage interactions.
19 May 2015 | | Contributor(s):: Drew LaMar
Interactive statistics package using R and Shiny.
Cats Teach Stats Binomial Test
17 May 2019 | | Contributor(s):: Jenny Hazlehurst, Suann Yang, Darcy Taniguchi
Fight stats anxiety! Students collect binary data from cute animal videos and analyze the data using a binomial test
Collecting and analyzing binomial data
15 Jul 2020 | | Contributor(s):: Suann Yang, Darcy Taniguchi, Jenny Hazlehurst
In this tool, students watch an Internet cat video, collect binomial data on cat paw usage, and graph and analyze the data with a binomial test in R using the swirl package.
10 Feb 2015 |
COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.
Cultivating Your Growth Mindset
22 Jun 2018 | | Contributor(s):: Kika Tuff, Jeremy M Wojdak, Arietta Fleming-Davies
Learn what a growth mindset is and how it improves learning
19 Oct 2015 |
DFIELD is an interactive tool that graphs a direction field for a given differential equation.
26 Apr 2019 | | Contributor(s):: Michael James, Lauren Mayer, Keely Copperthite
Simple agent based SIR model of Ebola epidemics.
24 Jun 2015 |
A quality control tool for high throughput sequence data.
Fitting of data by eye
30 Apr 2020 | | Contributor(s):: Dmitry Kondrashov
Allows user to select parameters to visually fit the plot of a data set
Gene Machine: The Lac Operon
08 Sep 2018 |
Explore the effects of mutations within the lac operon by adding or removing genes from the DNA.
16 Jun 2015 |
Image processing and analysis in Java.
Investigating Trade-offs among Mammal Traits
06 Jun 2018 | | Contributor(s):: Jackie Matthes
This app draws on a large species-level dataset with metabolic, life history, and ecological traits of most living and recently extinct mammal species. Users can select and plot traits, fit linear models to the data, and query displayed datapoints.
28 Jan 2015 | | Contributor(s):: Drew LaMar
Simulates both discrete and continuous time agent-based models of infectious disease dynamics on networks.
13 Jul 2018 | | Contributor(s):: Erich Huebner
An extensible environment for interactive and reproducible computing, based on the Jupyter Notebook and Architecture.
05 May 2017 | | Contributor(s):: Martin Hunt
Starts the Jupyter notebook server in your "notebooks" directory in your home directory.
Ka-me: Voronoi Image Analyzer 1.0
15 Jun 2015 | | Contributor(s):: John R Jungck
Ka-me is a Voronoi image analyzer that allows users to analyze any image with a convex polygonal tessellation or any spatial point distribution by fitting Voronoi polygons and their dual, Delaunay triangulations, to the pattern.
18 Jun 2015 |
A modular system for evolutionary analysis
Modeling the Mechanisms of Evolution
25 May 2018 | | Contributor(s):: Jackie Matthes
Simulate population-level mechanisms of evolution: genetic drift, gene flow, and natural selection.
23 Jan 2015 |
Multi-agent Programmable Modeling Environment