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Needleman - Wunsch Algorithm Exercise
05 Jun 2017 | Teaching Materials | Contributor(s):
By Michael Sierk
Saint Vincent College
This exercise is used in a sophomore-junior level bioinformatics course. The algorithm is introduced to the students who then complete the exercise.
https://qubeshub.org/publications/28/?v=3
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RNA-seq Analysis
05 Jun 2017 | Teaching Materials | Contributor(s):
By Bill Morgan1, Matthew Reeder2
1. The College of Wooster 2. Ohio State University
In this computer lab module, students learn how to process an RNA-seq data set to identify differentially expressed genes (DEGs). The samples for this data set were collected from yeast cells...
https://qubeshub.org/publications/27/?v=2
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Needleman - Wunsch Algorithm Exercise
13 Oct 2016 | Teaching Materials | Contributor(s):
By Michael Sierk1, Sam S Donovan2, Neal Grandgenett, Bill Morgan3, Mark A. Pauley4, Elizabeth Ryder5
1. Saint Vincent College 2. University of Pittsburgh 3. The College of Wooster 4. University of Nebraska at Omaha 5. Worcester Polytechnic Institute
This exercise is used in a sophomore-junior level bioinformatics course. The algorithm is introduced to the students who then complete the exercise.
https://qubeshub.org/publications/28/?v=2
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Exploring HIV Evolution
05 Aug 2016 | Teaching Materials | Contributor(s):
By Sam S Donovan1, Tony Weisstein2
1. University of Pittsburgh 2. Truman State University
In this activity you will study aspects of sequence evolution by working with a set of HIV sequence data from 15 different subjects (Markham, et al., 1998). You will first learn about the dataset,...
https://qubeshub.org/publications/24/?v=1
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Needleman - Wunsch Algorithm Exercise
03 Aug 2016 | Teaching Materials | Contributor(s):
By Michael Sierk
Saint Vincent College
This exercise is used in a sophomore-junior level bioinformatics course. The algorithm is introduced to the students who then complete the exercise.
https://qubeshub.org/publications/28/?v=1
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Wolf Sheep Predation Simulation Exercise
03 Aug 2016 | Teaching Materials | Contributor(s):
By Liz Ryder
Worcester Polytechnic Institute
This resource is an exercise to introduce students to agent-based modeling of biological systems through working with a simple existing model.
https://qubeshub.org/publications/29/?v=1
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RNA-seq Analysis
03 Aug 2016 | Teaching Materials | Contributor(s):
By Bill Morgan1, Matthew Reeder2
1. The College of Wooster 2. Ohio State University
In this computer lab module, students learn how to process an RNA-seq data set to identify differentially expressed genes (DEGs). The samples for this data set were collected from yeast cells...
https://qubeshub.org/publications/27/?v=1