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Needleman - Wunsch Algorithm Exercise
05 Jun 2017 | Teaching Materials | Contributor(s):
By Michael Sierk
Saint Vincent College
This exercise is used in a sophomore-junior level bioinformatics course. The algorithm is introduced to the students who then complete the exercise.
By Bill Morgan1, Matthew Reeder2
1. The College of Wooster 2. Ohio State University
In this computer lab module, students learn how to process an RNA-seq data set to identify differentially expressed genes (DEGs). The samples for this data set were collected from yeast cells...
Bioinformatics - Investigating Sequence Similarity
31 Jan 2017 | Teaching Materials | Contributor(s):
By Adam Kleinschmit1, Benita Brink1, Steven Roof2, Komal Vig3
1. Adams State University 2. Hampshire College 3. Alabama State University
This laboratory module, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.
13 Oct 2016 | Teaching Materials | Contributor(s):
By Michael Sierk1, Sam S Donovan2, Neal Grandgenett, Bill Morgan3, Mark A. Pauley4, Elizabeth Ryder5
1. Saint Vincent College 2. University of Pittsburgh 3. The College of Wooster 4. University of Nebraska at Omaha 5. Worcester Polytechnic Institute
Exploring HIV Evolution
05 Aug 2016 | Teaching Materials | Contributor(s):
By Sam S Donovan1, Tony Weisstein2
1. University of Pittsburgh 2. Truman State University
In this activity you will study aspects of sequence evolution by working with a set of HIV sequence data from 15 different subjects (Markham, et al., 1998). You will first learn about the dataset,...
03 Aug 2016 | Teaching Materials | Contributor(s):
Wolf Sheep Predation Simulation Exercise
By Liz Ryder
Worcester Polytechnic Institute
This resource is an exercise to introduce students to agent-based modeling of biological systems through working with a simple existing model.