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    The Genomics Education Partnership: Democratizing Genomics Research Experiences Nationwide
    This poster provides a general overview of the Genomics Education Partnership (GEP), and information on our Diversity, Equity, and Inclusion efforts are outlined in the accompanying video.

    Keywords: course-based undergraduate research experienceBioinformatics and Genomicsgenomics teaching and CUREsdiversity equity and inclusion

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    Phage Comparative Genomics Lab Manual
    A lab manual containing detailed instructions for several bioinformatics tools (dot plots, Phamerator maps, phylogenetic trees, and gene content similarity), all of which enable students to perform...

    Keywords: phageCUREcourse-based research experiences (CUREs)Comparative genomicsSEA-PHAGES

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    BCEENET- Broadening undergraduate participation in ecology and evolution research through CUREs using digitized natural history collections data (RCN-UBE Introduction)
    Biological Collections in Ecology and Evolution Network (BCEENET) brings together natural history collections (NHC) professionals, undergraduate educators, data experts, and researchers to support...

    Keywords: Evolutionecologybiologyundergraduate researchdata managementnatural history collectionscourse-based research experiences (CUREs)digitized natural history collectionsBCEENETcourse-based undergraduate research experiences (CUREs)RCN-UBE Introduction

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    Build Multiomic and Visualization Skills in Bioscience Lecture
    This resource promotes inclusive learning by using all free platforms to extend the central dogma to an applied experience. Genomics is focused on with literature reviews that are performed to...

    Keywords: geneticsBiochemistryBiology and Biochemistry EduationProtein StructureBioinformatics and GenomicsFunctional GenomicstranscriptomicsproteomicsRNAseqClinical genomicsprotein structure modelingInclusive teaching3D protein structure /function analysisinclusive classrooms3D protein structuresinclusivegene

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    Databases: A Study of Influenza
    This lesson introduces the student to the Influenza Research Database. Students will select Influenza genome sequences to see how they are related. Students tests hypotheses about evolutionary...

    Keywords: Bioinformatics EducationBioinformatics and Genomicsmolecular evolutionInfluenza

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    Introduction to Genome Annotation
    This exercise is an adaptation of the Annotation Lesson by Rosenwald et al. It introduces the use of bioinformatics tools to extract information from genome databases. It is a basic lesson on...

    Keywords: microbiologyGenome annotationBioinformatics EducationBioinformatics and Genomics

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    Mapping Specimen Occurrence Data in QGIS
    Use digitized natural history collection occurrence data from the Global Biodiversity Information Facility (GBIF) to map the distribution of the beaver in the state of Oregon from 1800-2020 using QGIS

    Keywords: natural history collectionsspecies distributionscourse-based research experiences (CUREs)digitized natural history collectionsQGIS

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    (Online) Figure of the Week: Skills for Interpreting Comparative Genomics Figures
    Students use their number sense to make observations and explain or guess at patterns shown, discussing in a weekly online Q&A forum.

    Keywords: graphsonline learningmath anxietyonline forummath attitudesResources @ BIOMAAPInterpreting Graphsdiscussion forumComparative genomics

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    Distributions CURE- Exploring Species Distribution Changes and their Drivers
    This course-based undergraduate research experience (CURE) uses digitized natural history collections data to answer questions about species distributions and their drivers. This inclusive CURE can...

    Keywords: Evolutionecologyidigbiodata management#iNaturalistcourse based undergraduate research experienceshuman impactsspecies distributionscourse-based research experiences (CUREs)digitized natural history collectionsGBIFQGISBCEENETgeoreferencing

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    Spatial Analysis with QGIS
    Map specimen data points using QGIS, connect them to form a polygon using the Concave Hull plugin, and calculate the range of a species to examine how it changes over time.

    Keywords: natural history collectionsspecies distributionscourse-based research experiences (CUREs)spatial analysisdigitized natural history collectionsQGIS

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    Sexual Dimorphism CURE: Exploring Melanized Wing Patterns of Pieridae Butterflies
    Teach a Course-based Undergraduate Research Experience (CURE) using digitized natural history collections data to test hypotheses on sexually dimorphic wing melanization patterns of Pieris rapae...

    Keywords: data analysismorphologyidigbiosexual dimorphismdata managementImageJsexual selectionnatural history collectionsbutterflycourse-based research experiences (CUREs)digitized natural history collectionsQGISmorphometricsBCEENETgeoreferencing

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    Molecular Basis of Sickle Cell Disease
    This multi part case on hemoglobin structure as it relates to oxygen binding and sickle cell disease focuses on utilizing bioinformatics and molecular visualization tools to learn about the sickle...

    Keywords: Hemoglobinmolecular visualization and analysisintroductory bioinformaticssickle cell diseasePDBMolecular Case Studyoxygen bindingmyoglobinmolecular literacy3D protein structuresstructural representations

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    Introduction to Phylogenetic Trees for Comparative Genomic Analysis
    In this activity, students are introduced to phylogenetic trees and networks as tools for analyzing evolutionary relationships.
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    Exploring Functions for Common Phage Proteins
    This resource is designed to help students better understand the functions of common structural and enzymatic phage proteins, and to relate these functions to phage structure using electron...
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    Applying phylogenetic tree building in MEGA X to forensic applications for identifying unknown specimens
    This exercise is designed to guide a learner through the construction of phylogenetic trees as a means of addressing research questions in forensic science such as the identification of previously...

    Keywords: taxonomyBioinformatics and GenomicsDNA Barcodinginvertebrate phylogeneticsforensic entomology

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    STEM Inclusive Teaching Practices Episode 4
    Beyond Techniques: A Phenomenological Approach to Inclusive Teaching with Dr. Mays Imad.

    Keywords: teaching strategiesinclusionInclusive teachingphenoPhenomenological

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    Mammal Bones & Homologies
    Short activity for a laboratory covering mammal skulls, teeth, bones, dichotomous keys, and homologies (using Blackburn lab Sketchfab). Included in the package is a document for teaching...
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    A Changing Climate in the Hawaiian Wet Forest: In-Person and Virtual Curriculum for Field Courses at Puʻu Makaʻala NAR
    Curriculum for Puʻu Makaʻala Huakaʻi with the National Ecological Observatory Network (NEON), developed by Teaching Change. This module was created to guide Teaching Change Field Courses at Puʻu...

    Keywords: climate changecommunityenvironmental sciencephenologyhuman-environmental interactionsNEONhawai'icareer connected

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    Critical inquiry for inclusive teaching of statistics
    Professional development workshop slides to help curate conversations in teaching statistics with a critical inquiry lens.

    Keywords: statisticsdata sciencefaculty developmentInclusive teachingbuilds

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    Teaching biostatistics using the Rule of Four
    A guide to helping intro bio students develop a deeper understanding of key statistical concepts by translating among numeric, graphical, verbal, and symbolic representations.

    Keywords: statisticsbiostatisticsintroductory biologyQuantitative reasoningBIOME 2022

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