You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Two-Way ANOVA
    In this lesson, students will learn the necessary statistical terms to understand two-way ANOVA, how to visualize their data, how to perform two-way ANOVA and interpret their results, and how to...

    Keywords: undergraduate researchANOVA

    1708

    views

    697

    downloads

    0

    comments

    0

    adaptations

    Climate change and Strawberries: A real-life problem-based activity for teaching ANOVA
    This is a real-life lab activity for teaching ANOVA using Problem-Based Learning and formatted for one-day (JMP or R) or two-day (JMP) implementations.

    Keywords: climate changeProblem based learningANOVAplant sciencetwo-way ANOVA

    1281

    views

    1742

    downloads

    0

    comments

    0

    adaptations

    Single Factor Analysis of Variance (ANOVA)
    This swirl lesson introduces students to theoretical and practical concepts about single-factor ANOVA analysis and an approach to conduct this type of analysis using R.

    Keywords: ANOVATukey HSD

    895

    views

    637

    downloads

    0

    comments

    0

    adaptations

    Analyzing Nutrient Simulation Experiments with a one-way ANOVA
    We discuss what tests are appropriate to analyze the data from nutrient simulation experiments. They will conduct one-way ANOVAs and a post hoc test using a dummy dataset and interpret the results.

    Keywords: biostatisticsInterdisciplinary STEMR programming languageaquatic ecologylimnologySwirl

    1229

    views

    708

    downloads

    0

    comments

    0

    adaptations

    Testing hypotheses about the role of wildfire in structuring avian communities
    This module assesses the role of wildfire in the eastern US and its impact on bird communities using NEON bird survey data from pre- and post- a major wildfire in the Great Smoky Mountains National...

    Keywords: data manipulationspecies richnessANOVAspecies diversitybirdswildfireBACI design

    30327

    views

    2099

    downloads

    0

    comments

    0

    adaptations

    BLAST Exercises for Analyzing Cloning Results
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. These activities have modified Lesson 1: Introduction to Genome...

    Keywords: Bioinformatics EducationBioinformatics and Genomics

    1278

    views

    399

    downloads

    0

    comments

    0

    adaptations

    Exploring the population dynamics of wintering bald eagles through long-term data
    Module included in Teaching Issues and Experiments in Ecology (TIEE) Volume 7 Students will identify dependent and independent variables, create graphs of dependent variables plotted against...

    Keywords: Resources @ ESA - TIEEcase studypopulation ecologyendangered speciesconservation biologymigration ecologybald eagle

    1367

    views

    815

    downloads

    0

    comments

    0

    adaptations

    Invasion, Restoration, and Response: Assessing changes in arthropod community assemblage using both parametric and non-parametric approaches
    This lesson, which is based around a recently published paper in the Journal of Ecological Applications, introduces students to both parametric and non-parametric approaches to statistical analysis...

    Keywords: ecologyANOVAInvasive Speciesspecies diversityquantitative analysisupper level wetland ecologysalt marshesarthropodsShannon diversity indexleast significant differences

    582

    views

    263

    downloads

    0

    comments

    0

    adaptations

    Human Population Growth and Greenhouse Gas Emissions
    Humans alter the climate by emitting greenhouse gases, by changing planetary albedo, and by altering atmospheric chemistry. Between 1900 and 2000, humans' emissions of carbon into the atmosphere...

    Keywords: demographyhuman populationgreenhouse gas emissions

    342

    views

    425

    downloads

    0

    comments

    0

    adaptations

    COVID-19: On the way to a vaccine
    This multi-part case study introduces the reader to the SARS-CoV-2 virus origins, the molecular basis of the infection, the development and severity of symptoms, and treatment.

    Keywords: BLASTprotein structure modelingmolecular visualization and analysisCOVID19PDB

    1107

    views

    4065

    downloads

    0

    comments

    0

    adaptations

    Phenotypic plasticity and predation
    Students predict changes to tadpole morphology and coloration after considering characteristics of the predator species and the prey themselves then test their own hypotheses (typically with...

    Keywords: RExcelimage analysisgraphingt-testsfrequency histogramsdata visualizationANOVAhypothesis formulationpredator-prey interactionsphenotypic plasticity

    2915

    views

    1429

    downloads

    0

    comments

    0

    adaptations

    Agent-Based Modeling Course Materials
    Materials created for an upper level ABM course. Prerequisite: Students have taken either (a) another modeling course, or (b) the introductory computer science sequence.

    Keywords: agent-based modelingindividual-based modelingcourse materials

    1968

    views

    2066

    downloads

    0

    comments

    0

    adaptations

    Save the Bees, Ditch the Plow: A lesson exploring how squash bee abundance is affected by varying levels of soil disturbance.
    The purpose of this lesson is to explore the effects that three varying degrees of soil disturbance has on the squash bee abundance that is observed. We will learn about the importance of...

    Keywords: beesmutualismpollinatorscommunity-based conservationno till farmingreduced tillage

    603

    views

    429

    downloads

    0

    comments

    0

    adaptations

    Impact of Warming on Tidal Wetlands
    This lesson uses a t-test and ANOVA to determine if higher temperatures will have a significant impact on change in mangrove height, change in belowground biomass, and change in surface elevation...

    Keywords: climate changesea-level risesalt marshTidal WetlandElevation ChangeMangrove Forest

    764

    views

    711

    downloads

    0

    comments

    0

    adaptations

    A Little Off The Top: The Effects Of Mountiantop Removal Mining On Salamanders
    This lesson will provide an explanation of mountaintop removal mining, and potential harms associated with it. Then the lesson will move into a statistical analysis of salamanders living in streams...

    Keywords: ANOVAsalamandersalamandersmountaintopmining

    720

    views

    604

    downloads

    0

    comments

    0

    adaptations

    How Luxury and Legacy Effects Shape Urban Avifauna in Los Angeles, California
    Is L.A.’s bird population shaped by historic redlining and income inequality? This lesson will introduce luxury and legacy effects hypotheses as they relate to urban avifauna in LA neighborhoods....

    Keywords: ANCOVASimple Linear Regressionurban ecologyredliningavian ecology

    257

    views

    186

    downloads

    0

    comments

    0

    adaptations

    Gaining familiarity with R and Work with NEON OS & IS data – Plant phenology & temperature - adaptation
    This adaptation introduces students to R and the NEON OS & IS data – Plant Phenology & Temperature tutorial. A planned extension will prompt students to develop a testable hypothesis, based on...

    Keywords: data in the classroomtool:rstudiophenologydata managementNEONtemperature

    2784

    views

    1445

    downloads

    0

    comments

    0

    adaptations

    Revealing Hidden Figures in Natural History Collections Working Group 2023 Update!
    Our 2023 BIOME Lightning Presentation sharing updates from the Hidden Figures Working Group including the first two published modules!

    Keywords: social justicenatural history collectionshidden figuresbiome23biome2023

    438

    views

    145

    downloads

    0

    comments

    0

    adaptations

    Digital Herbarium Lab with RStudio: Are shifting abundances of native species detectable over time?
    This 2- to 3-hour lab activity introduces sophomore-level students to digitized herbarium collections, R-coding, and potential reasons for shifting abundances in native and non-native plant species...

    Keywords: data analysistool:rstudionatural historyplant biologyinvasive plantsherbariumnative plantsdigitized natural history collectionsR code

    1403

    views

    911

    downloads

    0

    comments

    0

    adaptations

    Population dynamics in simple two-species experimental microcosms
    A two-week exercise which includes homework calculations and teaching resources. Students establish brine shrimp and Platymonas algal cultures and predict final densities.

    Keywords: population dynamicsecologyspecies interactionsbotanyecosystemsfood chainpopulation regulation

    1572

    views

    1348

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search