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    Caribbean coral reef structure and biodiversity - Comparing boosted regression tree & multiple regression approaches
    Creating and comparing boosted regression tree models to multiple regression models.
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    The Power of Data Standards
    Investigate data standards within the context of the Alpine Chipmunk and the Grinnell Study.

    Keywords: data in the classroomdata standardsdigitized natural history collectionsBLUE Fall 2019 FMNGrinnell

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    Louse Genetics, Genomics, and Gene Function...Oh My!
    In this module, students will be investigating a louse gene with an unknown function to determine if it might be important in the evolution of the louse ecomorphs.

    Keywords: parasitesgenomicsgene sequence analysisFunctional Genomics

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    Birds and Lice: Reciprocal Natural Selection
    This exercise investigates the form and function of lice and their relationship to their bird host.

    Keywords: BiodiversityparasitesbirdsCoevolutionnatural history collections

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    Data Visualization
    This is an introduction to the idea of data visualization and the importance of presenting data for understanding.

    Keywords: data in the classroomdata visualization

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    Communicating with Data: Digital Data Resources
    Students access, clean, configure, and standardize a dataset and create a relevant and scientifically valid data visualization to communicate science.

    Keywords: data in the classroomdata visualizationdigital resourcesbiodiversity informaticsbiodiversity collections

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    21st Century STEM Workforce Skills
    This activity includes a leadership assessment and associated exercise to encourage the development of 21st Century STEM Skills.

    Keywords: collaborationteam scienceleadership skills

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    Introduction to UNIX command line
    A laboratory module for an upper-level undergraduate biology course in which students will be able to carry out simple tasks using the Unix command-line environment.

    Keywords: NIBLSEcommand lineUNIXsequence analysis

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    Introduction to Genome Annotation
    This exercise is an adaptation of the Annotation Lesson by Rosenwald et al. It introduces the use of bioinformatics tools to extract information from genome databases. It is a basic lesson on...

    Keywords: microbiologyGenome annotationBioinformatics EducationBioinformatics and Genomics

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    An Introduction to Biodiversity Databases and Specimen Images
    In this module, students will be introduced to some biodiversity data resources and how to search for and download herbarium specimen images. They will be asked to think critically about the...

    Keywords: data in the classroombiodiversity informaticsnatural history collection

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    Neochromosomes: Creating transcriptional units with yeast Golden Gate assembly
    This resource is a series of protocols using the yeast Golden Gate (yGG) method as developed by Neta Agmon and Leslie Mitchell in Jef Boeke’s lab to assemble a functional yeast gene with...
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    Examining human impacts on tusk evolution in elephants using authentic research data using Serenity
    In this activity students explore and analyze real, authentic research data paired with HHMI’s “Selection for Tuskless Elephants” video in a hands-on investigation of human impacts on elephant...
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    The p53 Gene and Cancer
    This tutorial describes the structure and function of the p53 protein, how its activity is regulated in cells, and how mutant versions of p53 can lead to cancer.

    Keywords: Resources @ HHMI - BioInteractiveBiochemistrymolecular biologymacromoleculesGenetic disease

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    Mars Colony
    In this exercise students work in groups to design an agroecosystem to feed a Mars Colony while accounting for space and energy transfer limitations.

    Keywords: SimBioResources @ SimBio

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    Island Frogs
    This is an exercise in island biogeography that allows students to reconstruct splits in the evolutionary history of several hypothetical frog species.

    Keywords: Resources @ SimBio

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    Exam Reflective Writing Activities (4 different prompts)
    This is an extended version of Reflective Writing activities to use before 4 different exams.

    Keywords: reflective writing

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    Plant Defenses and Bioprospecting Mini-case Study
    This narrative mini-case study for use in undergraduate ecology courses reviews plant defense theory within the context of bioprospecting. Students learn about factors affecting plant defenses and...
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    The tale of two fish: A case study on vicariance and allopatric speciation
    This mini-case study guides students through multiple lines of evidence that suggests the most likely sister species to the lake species Sardinella tawilis, the sister species being the marine fish...

    Keywords: ecologyfishevolutionary ecologySpeciationVicariancePhilippines

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    Exploring the population dynamics of wintering bald eagles through long-term data using R
    The purpose of this modification was to take the analyses that were done in Excel and have the students perform them using R. Students were not given any R code for this activity, as R code was...

    Keywords: Resources @ ESA - TIEEcase studyR programming languagepopulation ecologyendangered speciesconservation biologymigration ecologyggplot2

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    Investigating human impacts on stream ecology: Intro to R
    This resource uses the Human Impact on Stream Ecology data set, background and questions and provides students an very general introduction to using R. Students perform basic summary statistics and...

    Keywords: graphingdata visualizationR programming languagedescriptive statisticsundergraduate environmental science

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