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    Build-a-Phage Lab Manual
    This is a lab manual for phage genome synthesis that includes both Building Block synthesis and Semi-synthetic assembly.
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    Using IF-AT (Immediate Feedback Assessment Technique) Forms for Collaborative Activities
    Presentation on IF-AT Forms at the 2019 BioQUEST & QUBES Summer Workshop
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    The Chi-Square Test
    This module introduces how to determine whether observation is significantly different from expectation in the context of understanding Chi-square Test. It is intended for an introductory biology...

    Keywords: ProbabilityProbability & StatisticsGenetics and EvolutionStatistical Testing

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    Investigating Determinants of Richness in Ephemeral and Permanent Wetlands Using Linear Models in Shiny
    This resource seeks to provide a quantitative platform by which students can be taught about interactive effects using the TIEE module created by Little (2018). Key to the adaptation is the use of...

    Keywords: aquatic macroinvertebrateslinear regressionhypothesis testingshinywetlands

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    Islands as a Tool for Teaching Ecology and Evolution
    Module for Ecology & Evolution course covering island biogeography principles, The scientific process and hypothesis testing, statistical methods (t-tests, regression), and online database use...

    Keywords: moduleResources @ AIM-UP!species richnessBiodiversityIsland biogeographyAIM-UP

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    Data simulation and randomization tests
    A participatory live-coding lesson on simulating data and performing randomization tests on ecological data in R.
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    Marriage Model (with errors)
    Marriage age model for use with NetLogo and ABM material

    Keywords: computational modelagent-based modelsocial networksmarriageChapter 6Chapter 6.5

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    Tell Them We Don't Want to Leave: The Marshallese and Sea-Level Rise (2014-10) | SESYNC
    This case study will expose students to the ways in which social-environmental systems operate and connect across different scales.

    Keywords: case studysocio-environmental data

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    Testing Goodness of Fit with the Chi-Square
    This is a MathBench module written for students to use in a self-study mode. It uses a narrative structure, humor, and everyday examples to step the learner through the mathematical principles...

    Keywords: Probabilitychi-squaredResources @ MathBench

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    How Many Salamanders are in the forest? Testing capture-recapture
    Collecting data on how populations respond to environmental change requires accurate estimates of population sizes. This activity explores one method for estimating population sizes across three...

    Keywords: salamanderCapture mark-recaptureAudience level - Introductory UG - majorsAudience level - Introductory UG - non-majors

    1996

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    900

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    Wolf Sheep Predation Simulation Exercise
    This resource is an exercise to introduce students to agent-based modeling of biological systems through working with a simple existing model.

    Keywords: simulationecologyIntroductoryNetLogoagent-based modelingagent-based modelLabbioinformaticspredator-preyUndergraduateNIBLSEInstructional SettingAudience LevelActivity LengthLess than 1 hoursimulation cycleC1. Role of bioinformaticsC6. ModelsReviewed at NIBLSEagent based modleing

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    Invasion, Restoration, and Response: Assessing changes in arthropod community assemblage using both parametric and non-parametric approaches
    This lesson, which is based around a recently published paper in the Journal of Ecological Applications, introduces students to both parametric and non-parametric approaches to statistical analysis...

    Keywords: ecologyANOVAInvasive Speciesspecies diversityquantitative analysisupper level wetland ecologysalt marshesarthropodsShannon diversity indexleast significant differences

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    Striped Bass: A Regulatory Success Story
    This module examines the Maryland striped bass moratorium (1985-1989) as a fisheries management success story. Maryland DNR striped bass young of the year data is utilized for least squares linear...

    Keywords: regressionfisheriesmonitoringrecruitmentstriped bassmoratoriumfish biologyfisheries ecologyspawninganadromousyoung of the yearrelative abundancechesapeake bayfish population

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    A "Box of Lessons" for Exploring Biomolecular Structure and Function
    Biomolecular structure and function is emphasized as a core concept in a variety of community determined educational standards for biology and chemistry. Most curricula introduce students to the...

    Keywords: bioinformaticsproteinsRNADNAmolecular visualizationbiomolecular structurebiomolecular visualizationProtein Data BankPDBMolecular CaseNet FMN

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    Going from student to medical doctor. The pathway to medicine with Abel Edossa and Dr. Oluwatoyin Weaver
    In this "lunch with a Scientist" episode, we interviewed a medical student and medical doctor to help us understand the path to medicine. Becoming a medical doctor is a very daunting task but with...

    Keywords: medicine

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    Hypoxia: A Case Study in R
    Aquatic ecosystems are home to a complex intersection of physical and biological factors and an intersection of natural and anthropogenic factors. In the Chesapeake Bay, low oxygen events have...

    Keywords: data analysisOceanographyProject EDDIE

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    Modification of "Exploring the population dynamics of wintering bald eagles through long-term data" module
    This module is a modification of the Beckstead et al. module in TIEE Volume 7. It includes a meta-cognition based model and self reflection, no statistics, and is organized to be done in 1-2...

    Keywords: Resources @ ESA - TIEEcase studypopulation ecologyendangered speciesconservation biologymigration ecology

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    Sampling Distributions and Null Distributions: two swirl lessons in R
    There are two complementary lessons. The first covers how sampling distributions are made and ID's their key properties. The second covers how null distributions and how the test statistic of a...

    Keywords: The Analysis of Biological Datateaching with technologySwirl

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    Binomial test
    This lesson focused on introducing students to binomial data analysis and reinforcing concepts of confidence intervals, p-value interpretation, and one- vs two-sided tests.
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    Leaf cutter ant foraging
    This module introduces students to leaf-cutter ants in the rainforests of Panama. Students derive their own research hypotheses regarding ant foraging or allometric scaling relationships.

    Keywords: leaf cutter antsforagingallometrylinear regressiongraphingdata visualizationResources @ AIMSbody size

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