You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    A Laboratory Module That Explores RNA Interference and Codon Optimization Through Fluorescence Microscopy Using Caenorhabditis elegans
    Scientific research experiences are beneficial to students allowing them to gain laboratory and problem-solving skills, as well as foundational research skills in a team-based setting. We designed...

    Keywords: microscopyC. elegansquantitative analysisinquiry-based learninggene expressionRNA interferenceCodon UsageLaboratory Module

    2591

    views

    204

    downloads

    0

    comments

    0

    adaptations

    Do Cell Phones Cause Brain Tumors?
    This YouTube video talks about whether there is a causal relationship between cellphone usage and brain cancer.

    Keywords: Presentation

    764

    views

    130

    downloads

    0

    comments

    0

    adaptations

    Module 1: Introduction to the Genome Browser: What is a Gene?
    This lesson introduces the University of California Santa Cruz genome browser to students, walking them through some of the key features so that it can be used for analysis of gene structure.

    Keywords: geneticsbioinformaticsGenome BrowserSimilarity searchesExonsIntronsEvidence TrackStart CodonStop Codon

    1345

    views

    2180

    downloads

    0

    comments

    0

    adaptations

    Java for-loop, investment problem, with debug flag usage demo
    BigJava Chapter 6, UTC CPSC1100 Fall 2017. Debug flag usage is shown.

    Keywords: videosjavabioinformaticsgenomicsyoutubeBig Java

    1287

    views

    301

    downloads

    0

    comments

    0

    adaptations

    Java String substring usage, initials
    CPSC1100 Fall 2017, UTC. Big Java Chapter 4.

    Keywords: videosjavabioinformaticsgenomicsyoutubeJava String

    1302

    views

    330

    downloads

    0

    comments

    0

    adaptations

    A clicker-based case study that untangles student thinking about the processes in the central dogma
    The central dogma of biology is a foundational concept that provides a scaffold to understand how genetic information flows in biological systems. Despite its importance, undergraduate students...

    Keywords: mutationtranscriptionphenotypecentral dogmatranslationDNA replication

    5712

    views

    979

    downloads

    0

    comments

    0

    adaptations

    AI Tools in Pedagogy
    Overview of ideas to discuss when it comes to usage of artificial intelligence in pedagogy

    Keywords: Artificial Intelligence

    311

    views

    122

    downloads

    0

    comments

    0

    adaptations

    Module 5: The Need for an Open Reading Frame
    In this module, students will learn to identify the open reading frames for a given gene, and define the phases of the splice donor and acceptor sites.

    Keywords: geneticsamino acidsmolecular biologyGenome BrowsergenomicsAssociated Protein Synthesis FactorsCodonMessenger RNARibosomestRNAs

    1154

    views

    1940

    downloads

    0

    comments

    0

    adaptations

    Predicting and classifying effects of insertion and deletion mutations on protein coding regions
    Mutations in genes can affect the encoded proteins in multiple ways, and some of these effects are counterintuitive. As for any other knowledge, students must create their own deep understanding of...

    Keywords: mutationcentral dogmatranslationframeshift

    3345

    views

    617

    downloads

    0

    comments

    0

    adaptations

    Instagram’s Impact on Self-Esteem of Local High Schoolers
    Social media’s effects on connecting people worldwide and its exponential growth in usage sparked studies on its effect on the mental state of users. In the local community of Saratoga,...

    Keywords: social mediamental health

    700

    views

    223

    downloads

    0

    comments

    0

    adaptations

    How to Find a Gene: Retrieving Information From Gene Databases
    A strong understanding of distinct gene components and the ability to retrieve relevant information from gene databases are necessary to answer a diverse set of biological questions. However, often...

    Keywords: NCBItranscriptiontranslationGene StructureGene databasesEnsembl

    1731

    views

    422

    downloads

    0

    comments

    0

    adaptations

    From Cre/LoxP to Fate Maps: Inclusive and Equitable Approaches for Engaging Developmental Biology Students in Experimental Design
    Engaging first generation underrepresented minority students in the process of inquiry in developmental biology is important to increase diversity in future graduate STEM education. One important...

    Keywords: experimental designC. elegansCre/LoxPFate mapheart developmentheart regenerationmousereporter constructzebrafish

    987

    views

    182

    downloads

    1

    comments

    0

    adaptations

    Augmented Reality Metabolic Pathways (ARMET)
    The ARMET app is developed using Unity, 3D molecules obtained from Protein Data Bank and ChemSpider-chemical structure database, the usage data are stored into a database (MySQL) and are analyzed...

    Keywords: BiochemistryAugmented RealityMetabolic Pathways

    1324

    views

    343

    downloads

    0

    comments

    0

    adaptations

    Understanding Gene Prediction Programs
    Introduces students to the key biological concepts underlying computational gene prediction. Outcomes include ability to analyze and evaluate output of gene prediction programs, and reflect on...

    Keywords: Genome annotationSEA-PHAGESgene predictiongenemarkcoding potentialcodon biassix frame translation

    1205

    views

    1398

    downloads

    2

    comments

    0

    adaptations

    Introduction to Genome Browser: What is a Gene?
    In this module, we will use a web-based visualization tool called a Genome Browser to explore the structure of a eukaryotic gene, and obtain a basic understanding of how this information is...
    768

    views

    193

    downloads

    0

    comments

    0

    adaptations

    Saving Endangered Species: Zoos, Museums and Biodiversity Data
    Meet Sinlan (Sheila) Poo who works with amphibians at the Memphis Zoo. Learn about Sinlan's research in applied conservation and how they use biodiversity data to study endangered species.

    Keywords: endangered speciesamphibiansBiodiversity data usageApplied ConservationZoo

    361

    views

    131

    downloads

    0

    comments

    0

    adaptations

    Sorting through the Data
    Meet Thomas McElrath, a insect collection manager at the Illinois Natural History Survey and beetle researcher. Tommy explains the value of data standards while discussing beetles and variations...

    Keywords: data standardssexdata skillsBiodiversity data usage

    275

    views

    93

    downloads

    0

    comments

    0

    adaptations

    Mapping New Discoveries: iNaturalist and Biodiversity Data
    Meet Lauren Esposito, the Curator of Arachnology at the California Academy of Sciences. Learn how they use community science to inform new species discovery.

    Keywords: endangered species#iNaturalistBiodiversity data usage

    350

    views

    139

    downloads

    0

    comments

    0

    adaptations

    A talk about the impacts of Tobacco with Rachel Hendricks
    We interview researchers of all rankings! In this interview, NIH postbaccalaureate fellow Rachel Hendricks discusses her undergraduate research in Dr. Karen Bernd's lab at Davidson College and the...

    Keywords: undergraduate researchTobacco

    477

    views

    111

    downloads

    0

    comments

    0

    adaptations

    A Muscular Dystrophy Case Study Illustrating the Phenotypic Effects of Mutation
    Mutations in genes can lead to a variety of phenotypes, including various human diseases. Students often understand that a particular mutation in a single gene causes a disease phenotype, but it is...

    Keywords: mutationProtein Structureethicscentral dogmahuman disease

    2993

    views

    346

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search