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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Flow regime and the National Ecological Observatory Network (NEON) wadeable stream sites
    This resource uses discharge data from three of NEON's wadeable stream sites to illustrate how streams can differ in their flow regimes using graphical analysis of annual hydrographs.

    Keywords: NEONstreamsstreamflow

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    The Science and Ethics of Gene Drives: An Active Learning Lesson in Genetics
    Coursework connecting biology to socially relevant issues and ethical questions can help students think about biology in interdisciplinary terms. Gene drives represent one topic involving both...

    Keywords: bioethicsCRISPR/Cas9Genetic modificationGene drives

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    Analyzing Data on Behavioral and Immunological Effects of Inflammation in Mice
    In this activity, students will learn about behavioral and immunological responses to a bacterial infection. The activity emphasized the host’s responses rather than bacterial manipulation of the...

    Keywords: Vision and Changedata analysisImmunologybehaviorphysiologyinflammationinterdisciplinary educationAntigenmouseImmunoReachSicknessleukocyteneutrophilLipopolysaccharideacute phase response

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    A Journal Club Project to Promote Interpreting and Presenting Information From the Primary Scientific Literature
    Many undergraduate students receive little guidance on how to critically read, interpret data within, or present information from the primary scientific literature before they begin senior...

    Keywords: primary literaturejournal clubScience CommunicationfeedbackPeer reviewgroup workOral presentationProcess skillsPeer evaluationDevelopmental neurobiology

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    Glycolysis Can Be Fun: Rediscovering Glycolysis as a Problem-Solving Introduction to Metabolism
    A thorough understanding of glycolysis forms a foundation for students to analyze subsequent topics in metabolism, a core competency recognized by multiple national societies for biology and...

    Keywords: Problem based learningPOGILenzymesGlycolysisMetabolismFermentationchemical reactionsCard sorting activityCofactors

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    Malaise Trap Project: Involving Undergraduate Students in Network Science
    A multi-week project for upper division undergraduate students to participate in network-level science, while simultaneously learning classic entomology skills of specimen collection and...

    Keywords: entomologynetwork science4DEE Framework

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    BioGrapher
    BioGrapher is an Excel front-end for the AT&T GraphViz graphical visualization and layout package (http://www.graphviz.org/).

    Keywords: network theorygraph theoryphylogenetic trees

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    Untitled QUBES Resource Draft (1)
    Social Justice Dialogues in STEM 2 is a resource to help facilitate conversations around various social contexts within STEM classroom.

    Keywords: EquitySTEM educationUDLjustice

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    Science Learning Spaces in undergraduate courses ( virtual and face to face) : Impact of Technology, Resources and Active Learning Activities
    Science Learning Spaces are evolving in both face to face and virtual learning environments. Effective utilization and identification of appropriate learning spaces helps in formation of engaging...

    Keywords: resourcesstemfaculty developmentUndergraduatesciencetechnologyWorkshop materialAnalysislearning spacescience learning spacemajor learning spaceminor learning spacelearning activitiesthinking

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    Learning Spaces in undergraduate science courses ( virtual and face to face)
    Learning Spaces are zones of interaction between undergraduates & undergraduates and undergraduates & professor. The traditional learning spaces were existing pre-pandemic however post-pandemic the...

    Keywords: active learningmentoringstemassessmentfaculty developmentteachingUndergraduateWorkshop materiallearning spacescience learning spaceprofessorsmajor learning spaceminor learning space

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    Learning Communities as a Driver for Humanizing STEM: Cultivating Authentic Conversations about Anti-Racism in Introductory Biology Pedagogy using Duoethnography
    In this study we present a retrospective debrief of a learning community of college biology professors who were exploring how to define and implement racial equity-focused practices and content in...

    Keywords: Equitysocial justicediversity

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    Learn biotechnology, biophysics and business through scientific thinking and innovation
    Scientific, leadership and innovation skills are also an integral framework of the curriculum. All of them together or individually are important for enhancement of knowledge, critical thinking,...

    Keywords: educationbusinessBiotechnologybiophysicsleadershiprecombinant DNAgroup workcloninginnovationscientific thinkingplasmid

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    Using genomic data and machine learning to predict antibiotic resistance: a tutorial paper
    Antibiotic resistance is a global public health concern. Bacteria have evolved resistance to most antibiotics, which means that for any given bacterial infection, the bacteria may be resistant to...

    Keywords: Tutorialmachine learningantibiotic-resistanceArtificial Intelligence

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    BioGraphI FMN Leader Guide (Template version) - Google Docs
    This document contains the leader guide for the Biologist and Graph Interpretation (BioGraphI) Project’s semester-long Faculty Mentoring Network (FMN). FMN leaders use it to organize the FMN, and...

    Keywords: professional developmentCurriculum developmenttemplateInclusive teachingleadershipDiscussionBioGraphIBioGraphI FMNfacilitation

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    Template BioGraphI FMN Flash Talks - Google Slides
    This document contains a template for creating the final show-and-tell slide deck for the Biologist and Graph Interpretation (BioGraphI) Network’s semester-long Faculty Mentoring Network (FMN)....

    Keywords: professional developmentPresentationtemplateBioGraphIBioGraphI FMNslide deck

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    How STEM Faculty Can Manage Generative A.I. use by Students
    Generative AIs (e.g., ChatGPT have arrived on college campuses. STEM faculty have begun grappling with this disruptive technology and have responded in a various way from grudging acceptance to...

    Keywords: stemInterdisciplinary STEMfaculty developmentMERLOTPresentationArtificial Intelligencebest practicesscienceFacultyleadershipChatGPTGenerative AIsSpeaker

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    Leveraging Panel Discussions to Promote Positive Representation, Develop Science Identity, and Shift Stereotypes
    The overrepresentation of cis straight white male scientists in examples used in Biology curriculum makes it difficult for students with other axes of diversity (race/ethnicity, gender, sexuality,...

    Keywords: professional developmentEquitydiversityscience identitysense of belongingCentering Student VoicesCareer Paneland InclusionPositive Representation of Diverse ScientistsFostering Community Between Students

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    BIOME 2024 Workshop: “But we don’t teach ecology!”
    OCELOTS modules are open-access case studies in tropical ecology that promote active learning, quantitative skills, and systems thinking. This workshop is the prelude to a Fall FMN for adapting...

    Keywords: International researchtropical biologyBIOME 2024

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    BioGraphI Guidelines for Interviews - Google Docs
    This document contains step-by-step instructions used by curriculum developers to plan, conduct, and publish interviews with scientists for the Biologist and Graph Interpretation (BioGraphI)...

    Keywords: Curriculum developmentInclusive teachinginterviewRole ModelsBioGraphIBioGraphI FMNcounterstereotypical scientist

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    BioGraphI FMN Notes Template (w/ Agenda) - Google Docs
    This document contains a template for taking notes during meetings of the Biologist and Graph Interpretation (BioGraphI) Network’s semester-long Faculty Mentoring Network (FMN). These notes are...

    Keywords: professional developmentagendatemplateBioGraphIBioGraphI FMN

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