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    Needleman - Wunsch Algorithm Exercise
    This exercise is used in a sophomore-junior level bioinformatics course. The algorithm is introduced to the students who then complete the exercise.

    Keywords: bioinformaticsUndergraduateNIBLSEalgorithmsincubatorsAudience LevelAdvancedActivity Length1 HourNeedleman-WunschC2. Computational conceptsIncubated at NIBLSE

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    Trauma-Informed Pedagogy: Teaching in Uncertain Times
    This free online seminar is designed for educators who are interested in learning about how they can teach their students despite the presence of trauma related to CoVID-19. Tuesday, April 28,...

    Keywords: uncertaintypandemic

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    Arctos Tutorial - BLUE Resource
    A user guide and video instructions for Arctos

    Keywords: databasesdata in the classroombiodiversity informaticsbiodiversity collections

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    Universal Design for Learning - Faculty Mentoring Network Introduction
    Overview of Universal Design for Learning, presented to a faculty mentoring network during a virtual meeting

    Keywords: Universal Design for LearningUDL

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    BLAST Exercises for Analyzing Cloning Results
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. These activities have modified Lesson 1: Introduction to Genome...

    Keywords: Bioinformatics EducationBioinformatics and Genomics

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    Lesson V - Phylogenetics
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson V is an introduction to Phylogenetics.

    Keywords: Bioinformatics EducationBioinformatics and Genomics

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    UDL of the Day: Introducing Faculty to Universal Design for Learning through Case Activities
    Presentation by BioQUEST on providing Universal Design for Learning professional development, given at the Octboer 2019 UDL-HE Digicon

    Keywords: professional developmentUniversal Design for LearningUDLDigiconUDL-HE

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    The Evolution of Human Skin Color
    My teaching notes for the Evolution of Human Skin Color case study.

    Keywords: EvolutionNatural SelectionSkin pigmentationskin colorvitamin Dvitamin B folateultraviolet lightUV light

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    Innovative Teaching Exchange: Asking Questions in Probability Class
    This is an article in MAA's Innovative Teaching Exchange that describes strategies to get students past thoughtless number crunching, guessing, and intuition when it comes to solving probability...

    Keywords: Probabilitypedagogyteaching strategies

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    EvolSeq
    An Excel worksheet that simulates the molecular evolution of DNA sequences.

    Keywords: molecular evolutionDNA

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    CyVerse Tutorials for NEON Data Science Institute 2018
    Resource for conducting data intensive research on CyVerse
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    Steve Palumbi and Megan Morikawa Study Coral Reef Damage in American Samoa
    Field research on coral bleaching suggests possibilities for saving threatened reefs.

    Keywords: ecologyResources @ HHMI - BioInteractiveVideoBiodiversityclimateAnimalsScientific ProcessScientific Methodologyearth and environmenthuman impactsscientists at workdiversity of organismsHigh School

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    Bioinformatics: CpG Islands
    This is an introductory bioinformatics exercise intended for use in a genetics course.

    Keywords: geneticsepigeneticsbioinformaticsNIBLSEcpggenome database

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthExtended Project

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    Instructor Solutions Second Edition SIMIODE Textbook HTML Version
    This is material we make available for instructors teaching a modeling-first approach to differential equations when using the Second Edition of SIMIODE Textbook, Differential Equations: A Toolbox...

    Keywords: textbookhtmlSIMIODE textbookSecond Edition

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    BioTA Podcast Episode #34 Biofilms Podcast Overview
    BioTA Episode #34: Biofilms Authors: Seth Higbee1, Pankaj Mehrotra2, J. Phil Gibson1 Prokaryotes are often taught to us as being free living single-celled organisms that lack membrane bound...

    Keywords: microbiologybacteriaprokaryotesBiofilmsExtracellular Polymeric Substances (EPS)16s Ribosomal RNA

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    2018-Hu-Huang-Dynamic Regulation Responding to an External Stimulus
    This study examines the dynamic regulation process responding to an external stimulus. This study introduces the driven damped oscillator model which has an additional parameter to identify...

    Keywords: dynamical systemsregulationsteady statesales modelexternal stimulus

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    2017-GR_Gustafson-Differential Equations Course Materials
    There are many applications from compartment and cascade analysis, recycling brine tank, home heating with multiple rooms, chemostat, microbes, heartbeats, lidocaine, nutrient flow in an aquarium,...

    Keywords: chemostatmicrobesbiomassforecastingtransfercompartmentpesticidesearthquaketankheatinglidocainebrineheartbeatsnutrient flowaquariumelectric networkscircuitsloggingbuildingcascade

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    2017-Alex_Honchar-Neural Networks For Solving Differential Equations
    In this post I want to show how I applied simple feed-forward NNs to different differential equations with increasing complexity: ODEs, second order ODEs, and, finally, PDEs.

    Keywords: neural networksCybenko theoremdiffusion equationfluid dynamics

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    2015-Sivakumar-EtAl-Approximate Analytical Expression of Concentrations in a Kinetic Model for Biogas Generation from Banana Waste
    The initial value problem in a kinetic model for biogas generation from banana waste is discussed. The model involves the system of non-linear differential equations which has variety of non-linear...

    Keywords: chemical kineticsMichaelis-Menten kineticsanaerobic digestionacidogenic stepsbananamethanogenic stepswastes

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