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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Differential Gene Expression during Xenopus laevis Development
    In Developmental Biology classes, students are challenged with understanding how differential gene expression guides embryonic development. It can be difficult for students to realize that genes...

    Keywords: gene expressionXenopusearly developmentembryofertilizationin situ hybridization

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    Measuring Size and Area of Digitized Specimens using ImageJ
    Use ImageJ to analyze morphological characters in digital images of natural history specimens. Skills are transferable to many organisms and other morphological measurements.

    Keywords: ImageJnatural history collectionscourse-based research experiences (CUREs)digitized natural history collections

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    Preparing Student Study Guides through Peer Collaboration in the Technological Era
    Incorporating active learning exercises into large lecture courses is particularly challenging, especially when it comes to examination preparation materials. Traditionally, study guides are used...

    Keywords: active learningDiscussionStudy Skills

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    Cutthroat trout in Colorado: A case study connecting evolution and conservation
    Evaluation of evidence is a key process skill for the core competencies of applying the process of science and using quantitative reasoning. This case study enables upper-division biology students...

    Keywords: population geneticsphylogeneticsSpeciationdivergencegene flow

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    Expanding the Reach of Crop Plants for Food Security: A Lesson Integrating Non-Majors Students Into the Discussion of Food Diversity and Human Nutrition
    University general education (GE) courses host students with various academic backgrounds, interests, and perspectives. Engaging students in GE classes with agricultural issues can be challenging...

    Keywords: cereal graincrop diversitycrop yieldglobal food systemhuman nutritionnutrient qualitypseudocereal grainstaple cropunderutilized crop

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    GSD QUBES Resource Draft (1)
    This QUBES module is focused towards AP Environmental studies courses. It includes hypothesis testing, transect sampling, Shannon Diversity Index, and scatter plot and bar graph creation in excel.

    Keywords: Community EcologyField researchspidersMicrosoft ExcelShannon diversity index

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    You and Your Oral Microflora: Introducing non-biology majors to their “forgotten organ”
    With limited time available for laboratory activities, introductory science courses for non-science majors typically use the laboratory period to reinforce material that was previously presented...

    Keywords: bacteriamicrobiomeBLASTmicrobesDNA replicationPolymerase chain reaction (PCR)

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    Navigating Bacterial Changes in Aging Organisms: Graphs, Patterns, and Models
    Aging is an incredibly important area of research, and recent biological advances implicate the intestines in aging pathologies. Given that the gut harbors an immense amount of an organism’s...

    Keywords: statisticsgraphingmathematics for life sciencesmathexponential growthPrecalculus

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    The Evolution (and Coevolution) of Flowering Plants Virtual Classroom
    In this lab, you will explore the diversity of flower and fruit adaptations that have evolved to accomplish pollination and seed dispersal and you will investigate the coevolution of angiosperms...

    Keywords: digital resourcespollination biologynatural history collectionsFloral Diversity

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    Invasion, Restoration, and Response: Assessing changes in arthropod community assemblage using both parametric and non-parametric approaches
    This lesson, which is based around a recently published paper in the Journal of Ecological Applications, introduces students to both parametric and non-parametric approaches to statistical analysis...

    Keywords: ecologyANOVAInvasive Speciesspecies diversityquantitative analysisupper level wetland ecologysalt marshesarthropodsShannon diversity indexleast significant differences

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    Using the Cell Engineer/Detective Approach to Explore Cell Structure and Function
    As instructors of introductory biology courses for majors and non-majors, we have struggled with teaching the concept of cell structure and function in an engaging way.  However, this is a...

    Keywords: cell functionCell StructureCellular diversityDynamic cellular functionOrganelle function

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    Best Practices and Recommendations for Designing Activities for Highlighting Diverse Scientists Through Quantitative Skill Development
    Poster on best practices to guide the design of quantitative skill-based learning activities that help create an inclusive environment. Presented at the 2021 BIOME Institute.

    Keywords: quantitative skillsinclusive learning designscientist spotlights2021 BIOMEscientific worldviews

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    Modification to City Parks
    Using a jigsaw approach, students calculated species richness, Shannon's diversity index and species evenness using the City Parks wildlife data.

    Keywords: Biodiversityspecies diversity

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    The module was used in lab following lecture material on pairwise interactions in ecology (emphasizing consumption, competition, mutualism), and parallel to community ecology (emphasizing food web...

    Keywords: Resources @ ESA - TIEEclimate changephenologyspecies diversityproblem set

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    Practice module included in Teaching Issues and Experiments in Ecology (TIEE) Volume 10

    Keywords: Resources @ ESA - TIEEclimate changephenologyspecies diversityproblem set

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    My Dog IS My Homework: Exploring Canine Genetics to Understand Genotype-Phenotype Relationships
    To facilitate understanding of the fundamental genetic concept of the genotype-phenotype relationship in our introductory biology students, we designed an engaging multi-week series of related...

    Keywords: gel electrophoresissequence analysiscanine geneticsdeoxyribonucleic acid (DNA)dog coat morphologygenotype and phenotypemutationsPolymerase chain reaction (PCR)single nucleotide polymorphism (SNP)

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    S-JEDI Learning Group Resource
    This resource provides a curriculum for a 6 week learning group centered on examining social justice, equity, diversity, and inclusion, specifically geared to organizational leaders in open...

    Keywords: social justiceodiversity equity and inclusion

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    Have fish assemblages recovered from the legacy of acid rain?
    This module provides a framework for upper-level ecology students to learn about limiting factors for stream fish diversity, using data from Shenandoah National Park and gaining skills in...

    Keywords: Problem based learningdiversitycooperative learninglimiting factorsaquatic ecosystemspyramid examlab reports

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    Louse and Human Coevolution
    This module examines the complicated co-evolution of Lice, Humans, and Great Apes

    Keywords: phylogeneticsBiodiversityparasitesCoevolutionhuman evolution

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    2014-Eckhoff-EtAl-Fun with maths-exploring implications of mathematical models for malaria eradication
    . In this note, four examples demonstrate both the effects of model structures and assumptions and also the benefits of using a diversity of model approaches fomalaria eradication strategies.

    Keywords: vaccinemalariamigrationeradicationseasonality

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