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    REMNet Tutorial, R Part 3: Creating Alpha Diversity Plots in R 5.2.19
    Video on creating alpha diversity plots in R from the Research Experiences in Microbiomes Network

    Keywords: VideoMicrobiology EducationR programming languagemicrobiomesCoastal wetlandsmanagementnortheastsea-level risesalt marshresearch in the classroomREMNeturban microbiomes

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    REMNet Tutorial, Excel Part 4: Focusing on Taxonomy 4.26.19
    Video on analyzing microbiome data in Excel from the Research Experiences in Microbiomes Network

    Keywords: The Analysis of Biological DataExcelVideoMicrobiology Educationteaching with technologymicrobiomesSwirlresearch in the classroomREMNeturban microbiomes

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    REMNet - A National Network for Integrating the Study of Microbiomes into Course-based Undergraduate Research Experiences (RCN-UBE Introduction)
    The mission of REMNet’s “Microbiomes for All!” is to serve as a centralized hub for information and resources on the integration of microbiome studies into the undergraduate curriculum. RemNet...

    Keywords: RCN-UBE Introduction

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    Graphing bacterial growth rates: semi-log graphs v linear graphs
    In this activity, students will explore the concept of binary fission, generation time, and bacterial growth curves, with an emphasis on the log phase. Students will use semi-log graphs and linear...

    Keywords: graphingexponential growthMicrobiology Educationmicrobiologybacteriagrowth rateUndergraduate STEM educationCommunity College Educationqbccmanipulate equationsCellular and Molecular BiologyCreate graphsInterpret graphsbinary fissionsemi-log graphlinear graphgrowth curvecreating graphsExponential and Logarithmic Functions

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    Improving Civic and Scientific Literacy through Scaffolded Thematic Classroom Research Experiences
    Poster on encouraging civic and scientific literacy presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: scientific literacyauthentic researchcivic literacySummer Workshop 2018

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    Using Collaborative Projects to Promote Active Learning of Microbial Skin Diseases and Their Impact on Everyday Lives
    One of the most daunting aspects of introductory clinical microbiology is learning details about a vast number of different microbial diseases that can infect humans. Each of these diseases has...

    Keywords: infectious diseasecollaborationpathogenesisTreatment of diseasesReal-life Microbiology

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    CBEC - Cell Biology Education Consortium (RCN-UBE Introduction)
    The CBEC helps faculty at PUIs move cancer cell culture research into the classroom. The mechanism that provides faculty with the resources they need to do this are modular protocols called Cell...

    Keywords: RCN-UBE Introduction

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    ImmunoReach: Incorporating Immunology into the Curriculum to Promote Interdisciplinary Science Education (RCN-UBE Introduction)
    This is an interdisciplinary faculty community of practice, that connects immunology educators with faculty in other biology disciplines, with an intention to increase access to concept-focused...

    Keywords: RCN-UBE Introduction

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    Reading and Discussing Popular Media to Increase SEA-PHAGES Student Engagement
    This module introduces ways for students to connect their SEA-PHAGES work and real life medical trials with events presented in Arrowsmith, Sinclair Lewis’s 1925 Pulitzer prize winning novel on...

    Keywords: discussionsbacteriophagereadingSEA-PHAGESpopular media

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    Using Linear Regression to Explore Environmental Factors Affecting Vector-borne Diseases
    In this activity students will use linear regression to analyze real data on vector-borne diseases and explore how environmental factors such as climate change or population density influence the...

    Keywords: ecologygraphingmicrobiologyqbccUnderstanding ratesCreate graphsInterpret graphsinterpret tablesConcepts in Statistics

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    Growing from Tiny Earth: A model for interdisciplinary CUREs at Johnson County Community College
    This resource includes a video that highlights how Tiny Earth is implemented and a poster that shows independent research done by students after participating in the CURE courses.

    Keywords: researchCURECUREs

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    Introduction to Genome Annotation
    This exercise is an adaptation of the Annotation Lesson by Rosenwald et al. It introduces the use of bioinformatics tools to extract information from genome databases. It is a basic lesson on...

    Keywords: microbiologyGenome annotationBioinformatics EducationBioinformatics and Genomics

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    Exploring HIV Evolution
    In this activity you will study aspects of sequence evolution by working with a set of HIV sequence data from 15 different subjects (Markham, et al., 1998). You will first learn about the dataset,...

    Keywords: EvolutionbioinformaticssequencingUndergraduateNIBLSEincubatorsHIVAudience LevelC1. Role of bioinformaticsC4. Bioinformatics toolsRecommended by NIBLSE

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    Writing Microbiology Resource Announcements (MRA)
    This resources provides a framework for students to write a Microbiology Resource Announcement, collaboratively.

    Keywords: phageBioinformatics and GenomicsGenome announcementmanuscriptMRA

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    BEIC - Creation of the Biology Educator/Researcher Cross-Segment Collective (RCN-UBE Introduction)
    The Biology Education Intersegmental Collaborative aids faculty learning communities consisting of 2- and 4-year partners to improve community college and transfer student outcomes. BEIC supports...

    Keywords: RCN-UBE Introduction

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    2011-Teleken-EtAl-Mathematical modeling of microbial growth in milk
    A mathematical model to predict microbial growth in milk was developed and analyzed. The model consists of a system of two differential equations of first order. The equations are based on physical...

    Keywords: bacteriadairymilkfood safetymicrobilogy

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    Using the IEDB to Predict Proteasomal Cleavage Events and T-cell Epitopes
    Research experiences provide a valuable view into the world of science and a great way to explore new fields and careers while developing critical thinking skills. The development and maintenance...

    Keywords: biologydatabaseImmunologydata sciencebioinformaticsBiotechnologyt-cellengineeringantibodyBioengineeringAntibody EngineeringlymphocytesProteinNetChopepitopeIEDBB-cellProteasomeProteasomal Cleavage

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    BioTA Podcast Episode #34 Biofilms Podcast Overview
    BioTA Episode #34: Biofilms Authors: Seth Higbee1, Pankaj Mehrotra2, J. Phil Gibson1 Prokaryotes are often taught to us as being free living single-celled organisms that lack membrane bound...

    Keywords: microbiologybacteriaprokaryotesBiofilmsExtracellular Polymeric Substances (EPS)16s Ribosomal RNA

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    2016-Lofgren-EtAl-Equations of the End Teaching Mathematical Modeling Using the Zombie Apocalypse
    In this article, we explore several uses of zombie epidemics to make mathematical modeling and infectious disease epidemiology more accessible to public health professionals, students, and the...

    Keywords: simulationinfectious diseasediseaseepidemicZombieWhite Zed

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    2012-Greer-Palin-Students in Differential Equations and Epidemiology Model a Campus Outbreak of pH1N1
    We describe a semester-long collaboration between a mathematics class and a biology class. Students worked together to understand and model the trajectory of the pandemic H1N1, pH1N1, outbreak...

    Keywords: H1N1pandemicspreadoutbreakpH1N1

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