You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Introduction to R with Biodiversity Data
    Students will learn R basics while downloading biodiversity data from multiple data repositories. This module will walk students through installing R, navigating R,writing reproducible scripts in...
    2768

    views

    1456

    downloads

    0

    comments

    0

    adaptations

    Setting Up Nonparametric Tests
    This swirl lesson will show you how to rearrange your data within R from one that shows a multiple factor design (2 x 2) to a single factor (4 levels) to allow for data analyses that require...
    1456

    views

    793

    downloads

    0

    comments

    0

    adaptations

    Interpreting one-factor ANOVA in R with swirl
    Interpreting One-Factor Analysis of Variance (ANOVA)

    Keywords: biostatisticsR programming languageSwirl

    1384

    views

    398

    downloads

    0

    comments

    0

    adaptations

    Maternal transmission of microbiome
    Understanding the cascading effects of the transfer of maternal microbiome during a vaginal birth (vs. a c-section) to the well-being of a newborn.

    Keywords: microbiomehuman reproduction

    1877

    views

    532

    downloads

    0

    comments

    0

    adaptations

    2011-Yanyu_Xiao-Study of Malaria Transmission Dynamics by Mathematical Models
    The novelty lies in the fact that different distribution functions are used to describe the variance of individual latencies. The theoretical results of this project indicate that latencies reduce...

    Keywords: infectious diseaseinfectionmalarialatencyspatial dispersalmulti-species

    145

    views

    61

    downloads

    0

    comments

    0

    adaptations

    2010-Shianga-EtAl-Computational model of the human glucose-insulin regulatory system
    A computational model of insulin secretion and glucose metabolism for assisting the diagnosis of diabetes mellitus in clinical research is introduced. The

    Keywords: glucose tolerance testsum of squared residualsmultiple shooting methodcost function

    115

    views

    44

    downloads

    0

    comments

    0

    adaptations

    Exploring multiple approaches to engage underrepresented students in research with natural history collections.
    The iDigBio team has leveraged natural history collections in a 3-pronged approach designed to engage undergraduates from underrepresented groups in collections-based research.

    Keywords: idigbionatural historynatural history museumsnatural history collectionsunderrepresented students

    2086

    views

    709

    downloads

    10

    comments

    0

    adaptations

    Teaching biostatistics using the Rule of Four
    A guide to helping intro bio students develop a deeper understanding of key statistical concepts by translating among numeric, graphical, verbal, and symbolic representations.

    Keywords: statisticsbiostatisticsintroductory biologyQuantitative reasoningBIOME 2022

    394

    views

    142

    downloads

    0

    comments

    0

    adaptations

    Microbiology Data Problems 2023
    This project focuses on the use of data analysis problems to introduce students to specific topics in microbiology and to give them practice in the interpretation of figures and tables of data. ...

    Keywords: data analysisundergraduate educationmicrobiologyjournal articles

    460

    views

    855

    downloads

    0

    comments

    0

    adaptations

    SCORE-UBE Final Evaluation Report
    Final evaluation report for the NSF funded RCN-SCORE Network which aimed to support members tackle shared issues in sustaining OER and OEP. The growth of the network continued to grow through...

    Keywords: STEM Evaluation

    706

    views

    210

    downloads

    0

    comments

    0

    adaptations

    Module 6: Alternative Splicing
    This module explores how multiple different mRNAs and polypeptides can be encoded by the same gene. After completing this module students will be able to explain how alternative splicing of a gene...

    Keywords: geneticsdata visualizationmolecular biologygenomicsexonintronalternative splicingSimilarity searchesMessenger RNA

    1225

    views

    2533

    downloads

    0

    comments

    0

    adaptations

    Lesson IV - Comparative Genomics
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson IV, Comparative Genomics, discusses some of the tools...

    Keywords: Bioinformatics EducationBioinformatics and Genomics

    1668

    views

    1167

    downloads

    0

    comments

    0

    adaptations

    DNA Subway Learning Resources
    DNA Subway is a NIBLSE Recommended resource. This is a collection of learning resources associated with DNA Subway.

    Keywords: phylogeneticsIntroductoryLabbioinformaticsUndergraduateNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignmentDNA SubwayInstructional SettingAudience LevelAdvancedActivity LengthExtended ProjectC1. Role of bioinformaticsC2. Computational conceptsC4. Bioinformatics toolsC5. Data retrievalC8. Data types

    2281

    views

    227

    downloads

    0

    comments

    0

    adaptations

    2017-GR_Gustafson-Differential Equations Course Materials
    There are many applications from compartment and cascade analysis, recycling brine tank, home heating with multiple rooms, chemostat, microbes, heartbeats, lidocaine, nutrient flow in an aquarium,...

    Keywords: chemostatmicrobesbiomassforecastingtransfercompartmentpesticidesearthquaketankheatinglidocainebrineheartbeatsnutrient flowaquariumelectric networkscircuitsloggingbuildingcascade

    186

    views

    65

    downloads

    0

    comments

    0

    adaptations

    BSL-4: Authorized Personnel Only
    National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection

    Keywords: infectious diseaseexperimental designbioinformaticsEbolaNIBLSECase It!PCRBLASTmultiple sequence alignmentPublished in National Center for Case Study Teaching in Sciencepolymerase chain reactionfebrile illnessvirusELISAenzyme linked immunosorbent assayfilovirusAfrica

    1609

    views

    229

    downloads

    0

    comments

    0

    adaptations

    Correlation Between Shutdown Orders and CO Levels Across the United States
    Research was conducted in summer 2020 to analyze the effect of the shutdown orders due to COVID-19 pandemic on the CO levels across the United States. Since the shutdown orders during the...

    Keywords: airpollution

    301

    views

    92

    downloads

    0

    comments

    0

    adaptations

    5-036-HalfCarVibration-ModelingScenario
    Vibration vehicle models provide an opportunity to integrate vehicle-based vibrations into a mechanical engineering vibrations course. The project is on a multiple-degree-of-freedom (MDOF)...

    Keywords: vibrationvehiclehalf-car modelfinite element analysisshock absorberssuspension

    270

    views

    110

    downloads

    0

    comments

    0

    adaptations

    Examining Medical and Scientific Racism Using the Story of Henrietta Lacks
    This is a semester-long project in which students read and discuss the story of Henrietta Lacks from multiple ethical perspectives. This project was developed for an undergraduate science ethics...

    Keywords: diversity equity and inclusiondecolonizing scienceanti-racist pedagogy

    1172

    views

    1577

    downloads

    0

    comments

    0

    adaptations

    When did I lose my legs? A limbless lizard tale
    Using oVERT project models students examine examples of extant traditional lizards, snakes and limbless lizards and create phylogenies based on trait and genetic data.

    Keywords: phylogeneticsevolutionary biologyHerpetologynatural history collections3D models#NGSSdigitized natural history collectionsoVertConvergent Evolution

    1408

    views

    546

    downloads

    0

    comments

    0

    adaptations

    Tools of Seeing
    This video really focuses on having a sense of scale, a Number Sense skill. We talk to astronomers, biologists, and geologists about how they use tools to enhance their sight and how this allows...

    Keywords: videosnumber sensescaleunit conversionsScience Forwardorders of magnitude

    1028

    views

    188

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search