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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Creating Game-Based IDEAs using Twine (BIOME 2022)
    Games and gamification-principles are powerful tools that increase engagement and improve learning outcomes when applied appropriately to STEM instruction. The interactive nature of games allows...
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    Genome Hunters: A Quantitative Biology Course-Based Undergraduate Research Experience (CURE)
    Poster outlining the process of designing, implementing, and assessing a new quantitative biology CURE course series. Presented at the 2021 BIOME Institute.

    Keywords: quantitative biologycourse-based undergraduate research experienceCURE2021 BIOME

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    Universal Design for Learning and Accessibility of the Day
    Short, daily case activity on Universal Design for Learning and Accessibility at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: Universal Design for LearningSummer Workshop 2018

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    Resources for Assessing Educational Interventions in Biology at the Collegiate Level
    Most scientific research is judged based on the quality of controlled experiments and carefully analyzed results. In addition, proper levels of regulation in terms of biosafety and animal usage are...

    Keywords: researchassessmentpedagogylearning gainsIRBregulatory compliance

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    Cell Collective
    Session presentation on an easy-to-use software, that makes this computational modeling approach accessible to any student and instructor

    Keywords: computational modelSummer Workshop 2018

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    Ciliate Genomics Consortium: a professional learning community sharing modular curricula to support undergraduate research in the classroom
    The Ciliate Genomics Consortium (CGC) employs an integrative teaching and research model that combines both inquiry-driven class laboratory activities and collaborative consortium pedagogies to...
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    Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project
    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    Keywords: NEONNational Ecological Observatory Network

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    Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project
    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    Keywords: NEONNational Ecological Observatory Network

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    Plants in the Human-Altered Environment (PHAE): EREN-NEON Flexible Learning Project
    A project to compare effects of a continuum of landscape alteration intensities on plant diversity, biomass, and ecosystem services, and to explore human socioeconomic connections to plants in the...

    Keywords: erenNEONdiversitybiomass4DEE Frameworkecosystemsocioeconomic effects

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    Using Comics to Make Science Come Alive
    Students often see science as a fragmented set of facts to be memorized, rather than concepts and processes that are relevant in their everyday lives. This is especially true for non-science...

    Keywords: role of science in society

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    COVID-19 Spread NetLogo ABM
    This project aimed to utilize agent-based modeling in NetLogo to create a simulation of COVID-19 spread in a traditional college classroom. The model allows for an evaluation of different...

    Keywords: classroomNetLogoagent-based modelingdisease prevention

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    Ethics in Synthetic Biology
    This collection of five activities provide students with an introduction to thinking about ethical concerns in human genome synthesis, gene editing, metabolic engineering, and synthetic genomes.

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

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    Understanding Protein Domains: A Modular Approach
    An understanding of protein structure, function, and interaction is central to biochemistry. One angle into this topic is to engage students in considering protein domains as modules that develop...

    Keywords: Protein Structure

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    Integrating Community Ecology Into the Study of Parasites: Exploring the Effect of Host Behavior on Parasite Transmission Rates
    Organismal life cycles are often presented as a set of facts to memorize in undergraduate biology courses. This approach is cognitively demanding for students and fails to convey how central life...

    Keywords: statisticsspecies interactionsQuantitative reasoninggraphsCommunity EcologyParasitologyfood webs

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    Antibiotic Resistance Genes Detection in Environmental Samples
    Our aim is to provide an authentic research experience for undergraduate students in a variety of biology courses through collaboration between a four-year university and a community college. This...

    Keywords: geneticsenvironmentmicrobiologyUndergraduateantibiotic-resistancePCRgel electrophoresisauthentic inquiry

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    USE C*Sci - The Undergraduate Student Experiences with Citizen Science Network to Transform Learning and Broaden Participation in Science (RCN-UBE Introduction)
    The Undergraduate Student Experiences with Citizen and Community Science Network includes educators, researchers, and project leaders excited about the use of participatory science approaches to...

    Keywords: RCN-UBE Introduction

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    IBP - Preparing to Prepare the 21st Century Biology Student: Using Scientific Societies as Change Agents for the Introductory Biology Experience (RCN-UBE Introduction)
    This was the first or second RCN-UBE award made. The Introductory Biology Project (IBP) collaborated with the National Association of Biology Teachers (NABT) to link introductory biology...

    Keywords: RCN-UBE Introduction

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    Genome Solver - A bioinformatics pipeline for community science
    The Genome Solver was an NSF-funded project developed as a way to train undergraduate life science faculty in basic web-based tools for bioinformatics. As part of the project we developed a one-day...

    Keywords: phylogeneticsbacteriophagebacteriaHorizontal Gene transferGenome Analysis

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    CyVerse Tutorials for NEON Data Science Institute 2018
    Resource for conducting data intensive research on CyVerse
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    Fostering Student to Student Collaboration Across Institutions in a Protein Centric CURE
    Collaboration is an essential component of research because it allows scientists to share expertise and tackle difficult scientific questions. While many undergraduate science courses include...

    Keywords: communicationBiochemistrycollaborationCUREhypothesisStudent to StudentInter institutionalProtein CentricAssignments

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