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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    What’s the DEAL – The Digital Encyclopedia of Ancient Life and Digital Atlas Apps
    The Digital Encyclopedia of Ancient Life and Digital Atlas Apps -- identify fossils and explore diversity and history of life on earth.

    Keywords: phylogeneticsdigital resourcesfossilspaleontologyevolutionary biologytaxonomyeduappsnatural history collections3D modelsgeologyopen textbookdigitized natural history collectionsencyclopediaatlasCretaceous World TCNPaleo Niches TCNvirtual teaching collectionFossil field guide

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    Faculty Mentoring Networks for Botany Faculty Professional Development
    Poster presented at the 2019 Botanical Society of America conference.

    Keywords: professional developmentbotanyfmn

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    QUBES – A virtual synthesis center catalyzing change in undergraduate quantitative biology education
    Presentation about QUBES given at HHMI Constellation Meeting: Advancing science students mastery of quantitative skills.

    Keywords: quantitative biology education

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    A CURE in traits and species distributions: Reproductive modes, range sizes, and natural history collections
    This course-based undergraduate research experience (CURE) focuses on developing hypotheses about how traits influence the range sizes of species. Topics with substantive content include symbioses,...

    Keywords: Evolutionbiostatisticsecologynatural history collectionsSymbiosisspecies distributionsherbariumplant functional traitsLichenReproductive biologyAppalachian mountains

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    Ecology of Infectious Disease: Data Mining the National Notifiable Diseases Surveillance System (NNDSS) for Ecological Patterns
    How to use publicly available infection case data to teach ecology and evolution of human infectious diseases.

    Keywords: Evolutionecologyinfectious diseasehumansjigsawsmall group workEvolutionary medicinedata explorationCDCNNDSS

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    From Dirt to Streptomyces DNA
    The purpose of this semester-long Lesson is to give students an authentic, course-based undergraduate research experience during which they learn basic and advanced microbiological and molecular...

    Keywords: MetabolismAntibiotic productionrRNA genesSecondary metabolitesStreptomyces

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    Using Images of Foraging Leaf-Cutter Ants to Teach Linear Regression
    This lesson offers students a realistic, open-inquiry research experience, even when lab or field research is not possible. We first introduce students to leaf-cutter ants and how they forage. Then...

    Keywords: linear regressionexperimental designPlant-insect interactionsSymbiosisForaging behavior

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    Learn genomics and bioinformatics through scientific thinking, creation and analysis (virtual and hands-on)
    Nucleic acid are biological molecules composed of nitrogen-containing bases, phosphate groups, and sugar molecules. The complimentary chemical bonding results in formation of double stranded DNA....

    Keywords: data analysisbioinformaticsnucleotidesproteinsRNAgenomicsScientific communicationscientific writingDNAmodelling scientific thinkinggenescientific thinkingcreation

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    Built-in Flexibility: Lessons learned to engage your community virtually
    Materials and resources for "Built-in Flexibility," an episode of the webinar series, "Adapting to COVID-19: Resources for Natural History Collections in a New Virtual World."

    Keywords: professional developmentidigbionatural history collectionswebinarcommunity engagementonline eventsonline professional developmentaccess

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    Problem-Based Learning for Physiology: Synthesizing the Cardiovascular System, Respiration, Macronutrient Metabolism, and Renal Function
    Problem Based Learning (PBL) is a valuable tool for helping students overcome reliance on memorization by scaffolding opportunities for them to practice the competency of...

    Keywords: MetabolismObesityblood pressurecardiac functioncardiovascularmetabolic syndromerenalRespirationrespiratory system

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    Developing Decolonial Consciousness in Biology Students Through Critical Reflection Assignments
    There is a growing call to decolonize curricula in academia, including in scientific disciplines. In the biology classroom, this includes highlighting a diverse array of scientists and illuminating...

    Keywords: primatessocietyZoologyantiracismdecolonizingstudent activismmuseum science

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    The BioTAP Professional Development Model: Expanding Empirical Research on Graduate Student Teaching Professional Development
    The Biology Teaching Assistant Project (BioTAP) provides a year-long mentoring program for practitioners and researchers of Biology Graduate Teaching Assistant Teaching Professional Development...

    Keywords: mentoringstemcommunityUndergraduateteaching professional developmentGraduate Teaching AssistantConfidence in Research Skills

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    Assessing in vivo Antimicrobial Activity Through the Analysis of Galleria mellonella Kaplan-Meier Plots
    Antimicrobials and their use in the treatment of bacterial infections are a fundamental lesson in all microbiology courses. Typically, cultivation-based methods are used to teach students about...

    Keywords: Antimicrobial TestingAntimicrobialsInvertebrate animal models

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    Integrating Community Ecology Into the Study of Parasites: Exploring the Effect of Host Behavior on Parasite Transmission Rates
    Organismal life cycles are often presented as a set of facts to memorize in undergraduate biology courses. This approach is cognitively demanding for students and fails to convey how central life...

    Keywords: statisticsspecies interactionsQuantitative reasoninggraphsCommunity EcologyParasitologyfood webs

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    Designing an Asynchronous, Self-Led Aquatic Ecology Field Trip
    Due to the COVID-19 pandemic and increasing need to teach students online, aquatic scientists are looking for ways to give students field experiences virtually. Asynchronous, self-led field trips...

    Keywords: observationecosystem structureexploration

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    Inclusive STEM Teaching Project Working Group- BIOME 2022
    After the BIOME 2022, a group got together to take the Inclusive STEM Teaching Project course and have weekly discussions during the course.

    Keywords: Inclusive teachingBIOME 2022

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    Universal Design for Learning - Faculty Mentoring Network Introduction
    Overview of Universal Design for Learning, presented to a faculty mentoring network during a virtual meeting

    Keywords: Universal Design for LearningUDL

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    CyVerse Tutorials for NEON Data Science Institute 2018
    Resource for conducting data intensive research on CyVerse
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    Mammal Bones & Homologies
    Short activity for a laboratory covering mammal skulls, teeth, bones, dichotomous keys, and homologies (using Blackburn lab Sketchfab). Included in the package is a document for teaching...
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    Build-a-Genome Lab Manual for RFP Synthesis
    This lab manual describes a multi-week lab project for the design, assembly from oliognucleotides, cloning, and sequencing of the RFP gene. This resource was developed as part of NSF Award...
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