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Incubators: A community based model for improving the usability of bioinformatics learning resources
07 Nov 2016 | Teaching & Reference Material | Contributor(s): Hayley Orndorf, Bill Morgan, Neal Grandgenett, Mark Pauley, Liz Ryder, Michael Sierk, Robin Wright, Anne Rosenwald, Liz Dinsdale, Eric Triplett, Sam S Donovan
This resource has been updated - find the current version here: https://qubeshub.org/publications/326There are a variety of barriers to faculty participation in scholarly approaches to teaching. Primary among these are the challenges undergraduate faculty face in finding and...
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Innovative Teaching Exchange: Asking Questions in Probability Class
25 Feb 2015 | Teaching & Reference Material | Contributor(s): Queena N. Lee-Chua
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/898This is an article in MAA's Innovative Teaching Exchange that describes strategies to get students past thoughtless number crunching, guessing, and intuition when it comes...
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Integrating Natural History Collections into Undergraduate Education: Creating the Resources and Growing the Community
14 Nov 2016 | Teaching & Reference Material | Contributor(s): Anna Monfils, Libby Ellwood, Debra Linton, Molly Phillips, Joseph A. Cook, Joseph Kerski, Tracy Barbaro, Sam S Donovan, Karen Powers, L. Alan Prather, Rob Guralnick
This resource has been updated - find the current version here: https://qubeshub.org/publications/328Natural history collection specimens and associated data provide unique physical and virtual opportunities to engage students in the practice of science in authentic, place-based lessons. We...
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Integrating student research projects into mathematical biology courses
21 Oct 2015 | Teaching & Reference Material | Contributor(s): Elissa Schwartz
This resource has been updated - find the current version here: https://qubeshub.org/publications/256Interdisciplinary mathematical biology courses have particular challenges. Specific teaching methods are necessary in order to engage students with varying levels of competency in mathematics...
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Interactions Between Water, Earth's Surface, and Human Activity
24 Aug 2015 | Teaching & Reference Material | Contributor(s): Sue Debari, Kyle Gray, Julie Monet
This resource has been updated - find the current version here: https://qubeshub.org/publications/288This module focuses on water and its importance to humans using Google Earth images of stream profiles in different climates, and with real river flooding data sets.
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Introduction to Genome Browser: What is a Gene?
21 Feb 2018 | Teaching & Reference Material | Contributor(s): Joyce Stamm
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/850 Genes encode information that our cells use to carry out their functions. In particular,...
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Introduction to Mathematical Modeling in Biotechnology, Cell Biology, and Physiology
27 Sep 2015 | Teaching & Reference Material | Contributor(s): Borbala Mazzag, Kamila Larripa
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/906DescriptionThe course is a mathematical and computational exploration of five diverse areas of biology: human locomotion, gene sequence analysis, signal transduction...
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Introduction to Probability, Statistics, and Random Processes
07 Nov 2016 | Teaching & Reference Material | Contributor(s): Hossein Pishro-Nik
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/896Check out the textbook called Introduction to Probability, Statistics, and Random Processes by Hossein Pishro-Nik. From the website: "It is an open access...
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Introduction to Quantitative Biology - Fall 2014 Syllabus
05 Jan 2015 | Teaching & Reference Material | Contributor(s): Drew LaMar
This resource has been updated - find the current version here: https://qubeshub.org/publications/240This course will be an overview of the mathematical tools used in quantitative analysis and modeling of biological systems. The goal is to develop quantitative reasoning skills through the...
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Introductory Science and Mathematics Education for 21st-Century Biologists
24 Feb 2015 | Teaching & Reference Material | Contributor(s): William Bialek, David Botstein
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/830Article abstract: "Galileo wrote that “the book of nature is written in the language of mathematics”; his quantitative approach to understanding the...
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Investigating the Footprint of Climate Change on Phenology and Ecological Interactions in North-Central North America
23 Sep 2015 | Teaching & Reference Material | Contributor(s): Kellen M. Calinger
This resource has been updated - find the current version here: https://qubeshub.org/publications/267The Ecological QuestionHave long-term temperatures changed throughout Ohio? How will these temperature changes impact plant and animal phenology, ecological interactions, and, as a result,...
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IQS 2.0: A Modularized Integrated Math and Science Course
21 Oct 2015 | Teaching & Reference Material | Contributor(s): Lester Caudill
This resource has been updated - find the current version here: https://qubeshub.org/publications/252For the past several years, the University of Richmond has offered an Integrated Quantitative Science (IQS) course, integrating introductory courses in five math and science disciplines, to...
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Java Applets for Power and Sample Size
10 Mar 2015 | Software (Off-site) | Contributor(s): Russell Lenth
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/899From the website:This software is intended to be useful in planning statistical studies. It is not intended to be used for analysis of data that have already been...
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Joel E. Greengiant Learns About Peas: From Nucleotides to Selection
17 Jun 2015 | Teaching & Reference Material | Contributor(s): Merle Heidemann, Peter J.T. White, Jim Smith
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/845This case study follows purveyors of peas, Joel E. and Jolene Greengiant, as they learn about the origin, biochemistry, genetics and eventual artificial selection of sweet...
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Linear models and linear mixed effects models in R: Tutorial 1
24 Apr 2015 | Teaching & Reference Material | Contributor(s): Bodo Winter
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/832Linear models and linear mixed models are an impressively powerful and flexible tool for understanding the world. This tutorial is the first of two tutorials that introduce...
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Linear models and linear mixed effects models in R: Tutorial 1
24 Apr 2015 | Teaching & Reference Material | Contributor(s): Bodo Winter
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/832Linear models and linear mixed models are an impressively powerful and flexible tool for understanding the world. This tutorial is the first of two tutorials that introduce...
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Linked Genes and Recombination: Advanced Punnett Squares
12 Jan 2015 | Teaching & Reference Material | Contributor(s): Dr. Kaci Thompson, Dr. Karen Nelson
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/743An online module in which students learn about more difficult genetics problems, including linked genes and crossing over. Quantitatively students learn about marginal...
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List of models in which observed patterns are Important
02 Aug 2015 | Teaching & Reference Material | Contributor(s): Steven F Railsback, Volker Grimm
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/876Supplemental material for Chapter 18 of Agent-Based and Individual-Based Modeling: A practical introduction by Railsback and Grimm (2012). This is a list of...
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Lotka-Volterra, the logistic equation, and Isle Royale
30 Jan 2015 | Teaching & Reference Material | Contributor(s): Stephen Malcolm
Students work through the basic Lotka-Volterra predator prey model using an example in which the prey exhibit density independence. Students then incorporate density dependence of prey items using several different features of Populus.
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Luria-Delbruck
14 Sep 2015 | Teaching & Reference Material | Contributor(s): Tony Weisstein, John R Jungck, Doug Green
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/777These two workbooks model the evolution of phage resistance in a bacterial population under two alternative hypotheses. Under the hypothesis of acquired immunity, mutation...