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  1. Disease Spread Simulation with M&M's and Information on the wider SIMIODE community

    03 Jul 2015 | Teaching & Reference Material | Contributor(s): Brian Winkel

    This resource has been updated - find the current version here: https://qubeshub.org/publications/358This is a Student Version of a Modeling Scenario from the community, SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations at...

  2. Ecology and Epidemiology in R

    09 May 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/837

  3. Ecology and Epidemiology in R

    09 May 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/837

  4. Free Introduction to R Course at DataCamp

    06 Nov 2016 | Teaching & Reference Material | Contributor(s): Drew LaMar

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/914In this introduction to R, you will master the basics of this beautiful open source language, including factors, lists and data frames. With the knowledge gained in this...

  5. Google Charts Example - Bubble

    18 May 2018 | Software (On-site)

    This is the "bubble" example from Joe Cheng's Google Charts package.

  6. Introduction to Genome Browser: What is a Gene?

    21 Feb 2018 | Teaching & Reference Material | Contributor(s): Joyce Stamm

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/850 Genes encode information that our cells use to carry out their functions. In particular,...

  7. Introduction to Probability, Statistics, and Random Processes

    07 Nov 2016 | Teaching & Reference Material | Contributor(s): Hossein Pishro-Nik

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/896Check out the textbook called Introduction to Probability, Statistics, and Random Processes by Hossein Pishro-Nik. From the website: "It is an open access...

  8. Investigating Trade-offs among Mammal Traits

    07 Jun 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    This app draws on a large species-level dataset with metabolic, life history, and ecological traits of most living and recently extinct mammal species. Users can select and plot traits, fit linear models to the data, and query displayed datapoints.

  9. IPMpack: an R package for Integral Projection Models

    19 Jan 2015 | Software (Off-site) | Contributor(s): C. Jessica E. Metcalf, Sean M. McMahon, Roberto Salguero-Gómez, Eelke Jongejans, Cory Merow

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/779IPMpack is an R package (R Development Core Team 2013) that allows users to build and analyse Integral Projection Models. An IPM is a demographic tool to explore the...

  10. Joel E. Greengiant Learns About Peas: From Nucleotides to Selection

    17 Jun 2015 | Teaching & Reference Material | Contributor(s): Merle Heidemann, Peter J.T. White, Jim Smith

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/845This case study follows purveyors of peas, Joel E. and Jolene Greengiant, as they learn about the origin, biochemistry, genetics and eventual artificial selection of sweet...

  11. Linear models and linear mixed effects models in R: Tutorial 1

    24 Apr 2015 | Teaching & Reference Material | Contributor(s): Bodo Winter

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/832Linear models and linear mixed models are an impressively powerful and flexible tool for understanding the world. This tutorial is the first of two tutorials that introduce...

  12. Measuring the Health of the Earth Using the Theory of Island Biography

    11 Mar 2015 | Teaching & Reference Material | Contributor(s): Jana Eggleston, Stephanie Renee Campau, Farshid Ahrestani, Holly D Gaff

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/868Biodiversity has been shown to be a good measure of the health of the planet system (McGrady-Steed et al. 1997). The more species and genetic diversity, the more stable the...

  13. Modeling the Mechanisms of Evolution

    25 May 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    Simulate population-level mechanisms of evolution: genetic drift, gene flow, and natural selection.

  14. Modeling the Mechanisms of Evolution

    25 May 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    Simulate population-level mechanisms of evolution: genetic drift, gene flow, and natural selection.

  15. Modeling: A Primer - The crafty art of making, exploring, extending, transforming, tweaking, bending, disassembling, questioning, and breaking models

    26 Feb 2016 | Teaching & Reference Material | Contributor(s): William Wimsatt, Jeff Schank

    This resource has been updated - find the current version here: https://qubeshub.org/publications/346Explore how to use, analyze, and criticize some important and historically influential models in biology in this text only module.

  16. ModelSim Population Biology Unit

    18 May 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/902This resource provides rich student modeling activities and materials, teacher resources, and much more, in the realm of agent based models applied to population biology....

  17. ModelSim Population Biology Unit

    18 May 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/902This resource provides rich student modeling activities and materials, teacher resources, and much more, in the realm of agent based models applied to population biology....

  18. Modernizing Statistics Education via Biology Applications

    21 Oct 2015 | Teaching & Reference Material | Contributor(s): Olcay Akman

    This resource has been updated - find the current version here: https://qubeshub.org/publications/254In most traditional statistics courses, instructors use data from different fields in an effort to give the courses an interdisciplinary flavor. They generally fail because these attempts...

  19. Numbers Count!: Calculus 2 course

    28 Mar 2015 | Teaching & Reference Material | Contributor(s): Claudia Neuhauser

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/751Based upon the University of Minnesota Bachelor's of Science in Health Science calculus curriculum (part 2), this course  introduces linear transformations,...

  20. Outstanding Oaks: Quercus phenology at NEON sites

    09 Oct 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    This app visualizes data from the National Ecological Observatory Network (NEON) observations of oak phenology at three different sites.