Collecting and analyzing binomial data

17 Jul 2020 | Software (On-site) | Contributor(s): Suann Yang, Darcy Taniguchi, Jenny Hazlehurst

In this tool, students watch an Internet cat video, collect binomial data on cat paw usage, and graph and analyze the data with a binomial test in R using the swirl package.

Swirl

10 Jul 2020 | Software (On-site)

Swirl: Learn R, in R

Radiant Lite

24 Jul 2019 | Software (On-site) | Contributor(s): Drew LaMar

Stripped down version of Radiant on QUBES

Google Charts Example - Bubble

18 May 2018 | Software (On-site)

This is the "bubble" example from Joe Cheng's Google Charts package.

R Shiny App Example

09 May 2018 | Software (On-site) | Contributor(s): Drew LaMar

This is a simple example used to demonstrate what is needed to host your R Shiny app on QUBESHub.

Introduction to Genome Browser: What is a Gene?

21 Feb 2018 | Teaching & Reference Material | Contributor(s): Joyce Stamm

This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/850 Genes encode information that our cells use to carry out their functions. In particular,...

Facial Bones

29 Sep 2017 | Teaching & Reference Material | Contributor(s): Katherine Poole

This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/873There are 14 beautiful facial bones six of them are paired and two of them are unpaired, for a grand total of 14 facial bones. The facial bones...

Radiant

16 Sep 2015 | Software (On-site)

Business analytics using R and Shiny.

Avida-ED Lab Book Summer 2017

27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser

The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection) 

IMMERSION Video

27 Jul 2017 | Teaching & Reference Material | Contributor(s): Alondra Torres-Navarro

QUBES – A virtual synthesis center catalyzing change in undergraduate quantitative biology education

06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan

This resource has been updated - find the current version here: https://qubeshub.org/publications/198Presentation about QUBES given at HHMI Constellation Meeting: Advancing science students mastery of quantitative skills. 

Design, Implementation, and Evaluation of Faculty Mentoring Networks: A Model for Promoting Faculty Teaching Scholarship

06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Kristin Jenkins, Alison N Hale, Gabriela Hamerlinck

This resource has been updated - find the current version here: https://qubeshub.org/publications/199NGSS, AP Biology, and Vision & Change all highlight the importance of quantitative skills to understanding biology. The Quantitative Undergraduate Biology Education and Synthesis (QUBES,...

Faculty Mentoring Networks: A Model for Promoting Teaching Scholarship in Quantitative Biology Education

06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Alison N Hale, Arietta Fleming-Davies, Gabriela Hamerlinck, Jeremy M Wojdak, Kristin Jenkins

This resource has been updated - find the current version here: https://qubeshub.org/publications/205/Faculty Mentoring Networks (FMNs) are designed to support the development of teaching scholarship by promoting teacher identity, self-efficacy, and knowledge/experience via four core design...

Reimagining professional development: Faculty mentoring networks as a model for connecting projects and teachers

13 Mar 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan

This resource has been updated - find the current version here: https://qubeshub.org/publications/206The Quantitative Undergraduate Biology Education and Synthesis (QUBES) project is working to design, implement, and assess online collaborative communities that promote teaching scholarship....

Bringing Real Ecological Data into the Classroom: DryadLab on QUBESHub

09 Dec 2016 | Teaching & Reference Material | Contributor(s): Gabriela Hamerlinck, Kristin Jenkins

This resource has been updated - find the current version here: https://qubeshub.org/publications/207Bringing Real Ecological Data into the Classroom: DryadLab on QUBESHub was presented at the annual meeting of the Association of College & University Biology Educators in 2016. 

Faculty Mentoring Networks: A model for professional development in undergraduate quantitative biology education

17 Nov 2016 | Teaching & Reference Material | Contributor(s): Alison N Hale, Arietta Fleming-Davies, Gabriela Hamerlinck, Melissa Aikens, Sam S Donovan, Kristin Jenkins, Jeremy M Wojdak

This resource has been updated - find the current version here: https://qubeshub.org/publications/208There is a significant need to design and test alternative models for faculty development around undergraduate science teaching. Existing models for helping faculty adopt evidence-based...

Integrating Natural History Collections into Undergraduate Education: Creating the Resources and Growing the Community

14 Nov 2016 | Teaching & Reference Material | Contributor(s): Anna Monfils, Libby Ellwood, Debra Linton, Molly Phillips, Joseph A. Cook, Joseph Kerski, Tracy Barbaro, Sam S Donovan, Karen Powers, L. Alan Prather, Rob Guralnick

This resource has been updated - find the current version here: https://qubeshub.org/publications/328Natural history collection specimens and associated data provide unique physical and virtual opportunities to engage students in the practice of science in authentic, place-based lessons. We...

Confronting the challenges of bringing research data into undergraduate classrooms using online faculty mentoring networks

07 Nov 2016 | Teaching & Reference Material | Contributor(s): Arietta Fleming-Davies, Gabriela Hamerlinck, Alison N Hale, Tom Langen, Teresa Mourad, Kristin Jenkins, Sam S Donovan

This resource has been updated - find the current version here: https://qubeshub.org/publications/327Using ecological research data in undergraduate courses has many potential benefits for student learning.  Students gain knowledge of ecological concepts, increased understanding of the...

Incubators: A community based model for improving the usability of bioinformatics learning resources

07 Nov 2016 | Teaching & Reference Material | Contributor(s): Hayley Orndorf, Bill Morgan, Neal Grandgenett, Mark Pauley, Liz Ryder, Michael Sierk, Robin Wright, Anne Rosenwald, Liz Dinsdale, Eric Triplett, Sam S Donovan

This resource has been updated - find the current version here: https://qubeshub.org/publications/326There are a variety of barriers to faculty participation in scholarly approaches to teaching. Primary among these are the challenges undergraduate faculty face in finding and...

Free Introduction to R Course at DataCamp

06 Nov 2016 | Teaching & Reference Material | Contributor(s): Drew LaMar

This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/914In this introduction to R, you will master the basics of this beautiful open source language, including factors, lists and data frames. With the knowledge gained in this...