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Resources: Software (On-site)

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  1. Fitting of data by eye

    03 May 2020 | Software (On-site) | Contributor(s): Dmitry Kondrashov

    Allows user to select parameters to visually fit the plot of a data set

  2. Radiant Lite

    24 Jul 2019 | Software (On-site) | Contributor(s): Drew LaMar

    Stripped down version of Radiant on QUBES

  3. Serenity

    25 Jun 2017 | Software (On-site) | Contributor(s): Drew LaMar

    A platform-independent browser-based interface to data science tools for the classroom.

  4. Cats Teach Stats Binomial Test

    17 May 2019 | Software (On-site) | Contributor(s): Jenny Hazlehurst, Suann Yang, Darcy Taniguchi

    Fight stats anxiety! Students collect binary data from cute animal videos and analyze the data using a binomial test

  5. Ebola Model

    26 Apr 2019 | Software (On-site) | Contributor(s): Michael James, Lauren Mayer, Keely Copperthite

    Simple agent based SIR model of Ebola epidemics.

  6. Outstanding Oaks: Quercus phenology at NEON sites

    22 Jun 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    This app visualizes data from the National Ecological Observatory Network (NEON) observations of oak phenology at three different sites.

  7. Gene Machine: The Lac Operon

    08 Sep 2018 | Software (On-site)

    Explore the effects of mutations within the lac operon by adding or removing genes from the DNA.

  8. Jupyter Lab

    13 Jul 2018 | Software (On-site) | Contributor(s): Erich Huebner

    An extensible environment for interactive and reproducible computing, based on the Jupyter Notebook and Architecture.

  9. Cultivating Your Growth Mindset

    22 Jun 2018 | Software (On-site) | Contributor(s): Kika Tuff, Jeremy M Wojdak, Arietta Fleming-Davies

    Learn what a growth mindset is and how it improves learning

  10. Investigating Trade-offs among Mammal Traits

    06 Jun 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    This app draws on a large species-level dataset with metabolic, life history, and ecological traits of most living and recently extinct mammal species. Users can select and plot traits, fit linear models to the data, and query displayed datapoints.

  11. Modeling the Mechanisms of Evolution

    25 May 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    Simulate population-level mechanisms of evolution: genetic drift, gene flow, and natural selection.

  12. Google Charts Example - Bubble

    18 May 2018 | Software (On-site)

    This is the "bubble" example from Joe Cheng's Google Charts package.

  13. R Shiny App Example

    09 May 2018 | Software (On-site) | Contributor(s): Drew LaMar

    This is a simple example used to demonstrate what is needed to host your R Shiny app on QUBESHub.

  14. Radiant

    16 Sep 2015 | Software (On-site)

    Business analytics using R and Shiny.

  15. Jupyter Notebook

    05 May 2017 | Software (On-site) | Contributor(s): Martin Hunt

    Starts the Jupyter notebook server in your "notebooks" directory in your home directory.

  16. Workspace Dev

    14 Jun 2016 | Software (On-site) | Contributor(s): Erich Huebner

    Upcoming OS development workspace

  17. Wood Density

    15 Oct 2015 | Software (On-site)

    Wood density shiny app

  18. OpenRefine

    18 Jan 2016 | Software (On-site)

    OpenRefine (formerly Google Refine) is a powerful tool for working with messy data: cleaning it; transforming it from one format into another; and extending it with web services and external data.

  19. DFIELD

    19 Oct 2015 | Software (On-site)

    DFIELD is an interactive tool that graphs a direction field for a given differential equation.

  20. R Commander

    04 Sep 2015 | Software (On-site) | Contributor(s): Drew LaMar

    R provides a powerful and comprehensive system for analysing data and when used in conjunction with the R-commander (a graphical user interface, commonly known as Rcmdr) it also provides one that is easy and intuitive to use.