Resources: Software (On-site)

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  1. Radiant

    16 Sep 2015 | Software (On-site)

    Business analytics using R and Shiny.

  2. Serenity

    25 Jun 2017 | Software (On-site) | Contributor(s): Drew LaMar

    A platform-independent browser-based interface to data science tools for the classroom.

  3. Jupyter Notebook

    05 May 2017 | Software (On-site) | Contributor(s): Martin Hunt

    Starts the Jupyter notebook server in your "notebooks" directory in your home directory.

  4. Workspace Dev

    14 Jun 2016 | Software (On-site) | Contributor(s): Erich Huebner

    Upcoming OS development workspace

  5. Wood Density

    15 Oct 2015 | Software (On-site)

    Wood density shiny app

  6. OpenRefine

    18 Jan 2016 | Software (On-site)

    OpenRefine (formerly Google Refine) is a powerful tool for working with messy data: cleaning it; transforming it from one format into another; and extending it with web services and external data.


    19 Oct 2015 | Software (On-site)

    DFIELD is an interactive tool that graphs a direction field for a given differential equation.

  8. R Commander

    04 Sep 2015 | Software (On-site) | Contributor(s): Drew LaMar

    R provides a powerful and comprehensive system for analysing data and when used in conjunction with the R-commander (a graphical user interface, commonly known as Rcmdr) it also provides one that is easy and intuitive to use.

  9. BactVsPhage

    27 Jun 2015 | Software (On-site) | Contributor(s): Drew LaMar

    Simulates basic models in theoretical ecology, as well as three models of bacteria/bacteriophage interactions.

  10. FastQC

    24 Jun 2015 | Software (On-site)

    A quality control tool for high throughput sequence data.

  11. Mesquite

    18 Jun 2015 | Software (On-site)

    A modular system for evolutionary analysis

  12. ImageJ

    16 Jun 2015 | Software (On-site)

    Image processing and analysis in Java.

  13. Ka-me: Voronoi Image Analyzer 1.0

    15 Jun 2015 | Software (On-site) | Contributor(s): John R Jungck

    Ka-me is a Voronoi image analyzer that allows users to analyze any image with a convex polygonal tessellation or any spatial point distribution by fitting Voronoi polygons and their dual, Delaunay triangulations, to the pattern.

  14. BioRadiant

    19 May 2015 | Software (On-site) | Contributor(s): Drew LaMar

    Interactive statistics package using R and Shiny.

  15. Statistical Power for One-Sample t-Test

    18 May 2015 | Software (On-site) | Contributor(s): Drew LaMar

    Interactive visualization of statistical power for a one-sample t-test.

  16. PPLANE

    02 Apr 2015 | Software (On-site)

    PPLANE is a tool for Phase Plane Analysis of a System of Differential Equations of the form: x' = dx/dt = f(x,y), y' = dy/dt = g(x,y).

  17. XPPAUT

    31 Mar 2015 | Software (On-site)

    XPPAUT is a general numerical tool for simulating, animating, and analyzing dynamical systems.

  18. QtOctave

    19 Feb 2015 | Software (On-site)

    QtOctave is an open source GUI front-end application for GNU Octave.

  19. IONTW

    28 Jan 2015 | Software (On-site) | Contributor(s): Drew LaMar

    Simulates both discrete and continuous time agent-based models of infectious disease dynamics on networks.

  20. RStudio IDE for R

    22 Jan 2015 | Software (On-site)

    RStudio is a GUI for R, the statistical programming language.