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Using computational molecular modeling software to demonstrate how DNA mutations cause phenotypes
04 Jan 2019 | Teaching Materials | Contributor(s):
By Tara Phelps-Durr
This lesson is a five-week series of laboratory activities designed to help students transition from applying lower order thinking skills to the central dogma to applying higher-order thinking skills.
Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching
By Mark Phillip Peterson1, Jacob T Malloy2, Vincent P Buonaccorsi2, James H Marden3
1. Viterbo University 2. Juniata College 3. Pennsylvania State University
This lesson plan was created to teach RNAseq analysis as a part of GCAT-SEEK network. It is provided here, both in finished form and with the modifiable source code, to allow flexible adaptation to...
Murder by HIV? Undergraduate edition
By Naowarat (Ann) Cheeptham1, Laura B. Regassa2, Michèle I. Shuster3
1. Thompson Rivers University 2. Georgia Southern University 3. New Mexico State University
Bioinformatics case study focusing on phylogenetic tree interpretation, published in the National Center for Case Study Teaching in Science
Making toast: Using analogies to explore concepts in bioinformatics
By Kate L. Hertweck
University of Texas at Tyler
Module using analogies to introduce students to genomics
An Introduction to the R Programming Environment
By K. A. Garrett1, P. D. Esker1, A. H. Sparks1
Kansas State University
An online module introducing students and biologists to R, published in American Phytopathological Society
Infectious Chocolate Joy with a Side of Poissonian Statistics: An activity connecting life science students with subtle physics concepts
By Eric T. Holland1, Greg Manley1, Tamara Chiba1, Rona Ramos1, Simon Mochrie1, Jennifer Frederick1
Lesson on what it means for biological processes to be Poissonian, published in CourseSource
Homologous chromosomes? Exploring human sex chromosomes, sex determination and sex reversal using bioinformatics approaches
By Kelsey Metzger
University of Minnesota, Rochester
In this four- part guided activity, students will learn about the structure and function of human autosomal and sex chromosomes, view and interpret gene maps, and gain familiarity with basic...
A Hands-on Introduction to Hidden Markov Models
By Tony Weisstein1, Elena Gracheva2, Zane Goodwin2, Zongtai Qi2, Wilson Leung2, Christopher D. Shaffer2, Sarah C.R. Elgin2
1. Truman State University 2. Washington University in St. Louis
A lesson in which students will understand the basic structure of an HMM, the types of data used in ab initio gene prediction, and its consequent limitations.
Genes and Civil Liberties
By Philip L. Bereano
University of Washington, Seattle
This lesson focuses on examining civil liberties issues as they relate to genetic research. Students can choose to represent an organization, real or fictional, that will report to a task force on...
Finding Selection in All the Right Places
03 Jan 2019 | Teaching Materials | Contributor(s):
By Juliet F. K. Noor, Mohamed A. F. Noor
Lab introducing students to evolutionary genetics using bioinformatics and biocuration, published as GSA Learning Resource
Exploration of the Human Genome by Investigation of Personalized SNPs
By Lani C. Keller
To increase students' interest in their own genomes, this computer-based laboratory lesson is designed to be coupled with the opportunity for the students to be genotyped by the consumer sequencing...
Colon Cancer: A Case of Genetic Bad Luck
By Anne M. Casper
Eastern Michigan University
Case study developed for an introductory genetics class published in the National Center for Case Study Teaching in Science
Bioinformatics / Neuroinformatics
By William Grisham
University of California, Los Angeles
This module is a computer-based introduction to bioinformatics resources. This easy-to-adopt module weaves together several important bioinformatic tools so students can grasp how each is used in...
Behavioral Genetics: Investigating the genes of a complex phenotype in fruit flies
By Craig E. Stanley, Jr., Charles Hadley S. King, IV, Michelle Thornton, Rob J. Kulathinal
Introductory genetics laboratory published as GSA Learning Resource
Anne M Brown
Dr. Michael John Budziszek Jr.
Bioinformatics - Investigating Sequence Similarity
04 Dec 2018 | Teaching Materials | Contributor(s):
By Adam Kleinschmit1, Benita Brink1, Steven Roof2, Carlos Christopher Goller3, Sabrina Robertson3
1. Adams State University 2. Fairmont State University 3. North Carolina State University
This laboratory module, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.
Complete Set of Lessons
01 Nov 2018 | Teaching Materials | Contributor(s):
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
The Genome Solver Project began as a way to teach faculty some basic skills in bioinformatics - no coding or scripting. These Lessons also work well in the undergraduate classroom, culminating with...