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Nicole M. Vega-Cotto
https://qubeshub.org/community/members/12486
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Mark Ewusi Shiburah
https://qubeshub.org/community/members/12335
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A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!
07 Jun 2019 | Teaching Materials | Contributor(s):
By Rachael St. Jacques1, Max Maza1, Sabrina Robertson2, Guoqing Lu3, Andrew Lonsdale4, Ray A Enke5
1. Department of Biology, James Madison University 2. Department of Psychology & Neuroscience, University of North Carolina at Chapel Hill 3. Department of Biology and School of Interdisciplinary Informatics, University of Nebraska Omaha 4. ARC Centre of Excellence in Plant Cell Walls, Melbourne University 5. James Madison University
This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.
https://qubeshub.org/publications/1092/?v=2
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May 30 2019
Genomics Workshop Pilot and BugBBQ
This February, a small group of committed community members, led by Taylor Reiter at the University of California, Davis, completed a major update to the Data Carpentry Genomics curriculum. This...
https://qubeshub.org/news/events/details/1729
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William M Maza
https://qubeshub.org/community/members/11616
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Rachael M St. Jacques
https://qubeshub.org/community/members/11576
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A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!
28 Feb 2019 | Teaching Materials | Contributor(s):
By Rachael St. Jacques1, Max Maza1, Sabrina Robertson2, Guoqing Lu3, Andrew Lonsdale4, Ray A Enke5
1. Department of Biology, James Madison University 2. Department of Psychology & Neuroscience, University of North Carolina at Chapel Hill 3. Department of Biology and School of Interdisciplinary Informatics, University of Nebraska Omaha 4. ARC Centre of Excellence in Plant Cell Walls, Melbourne University 5. James Madison University
This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.
https://qubeshub.org/publications/1092/?v=1
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Mao-Lun Weng
https://qubeshub.org/community/members/10881
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Making toast: Using analogies to explore concepts in bioinformatics
04 Jan 2019 | Teaching Materials | Contributor(s):
By Kate L. Hertweck
University of Texas at Tyler
Module using analogies to introduce students to genomics
https://qubeshub.org/publications/1003/?v=1
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A Hands-on Introduction to Hidden Markov Models
04 Jan 2019 | Teaching Materials | Contributor(s):
By Tony Weisstein1, Elena Gracheva2, Zane Goodwin2, Zongtai Qi2, Wilson Leung2, Christopher D. Shaffer2, Sarah C.R. Elgin2
1. Truman State University 2. Washington University in St. Louis
A lesson in which students will understand the basic structure of an HMM, the types of data used in ab initio gene prediction, and its consequent limitations.
https://qubeshub.org/publications/999/?v=1
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Anne M Brown
https://qubeshub.org/community/members/10267
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Vince Buonaccorsi
https://qubeshub.org/community/members/9812
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Ken Saville
https://qubeshub.org/community/members/9740
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Peter Sudmant
https://qubeshub.org/community/members/9727
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christos noutsos
https://qubeshub.org/community/members/9363
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Cintia Fabiana Hongay
https://qubeshub.org/community/members/9236
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Catherine Reinke
https://qubeshub.org/community/members/9003
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Karobi Moitra
Dr. Karobi Moitra is a Clare Boothe Luce Associate Professor of Molecular Biology at Trinity Washington University in Washington DC and a former Assistant Provost for the Sciences at Trinity. She...
https://qubeshub.org/community/members/8688
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Ahmed Hasan
https://qubeshub.org/community/members/8230
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James S. Santangelo
https://qubeshub.org/community/members/8226