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NEON Data in the Classroom: Implementing and Adapting an Open Education NEON Resource “Quantifying the Drivers and Impacts of Natural Disturbance Events-The 2013 Colorado Floods” for the Southern California Classroom.
11 Dec 2018 | Teaching Materials | Contributor(s):
By Adriane Clark Jones
Mount Saint Mary's University
Natural disasters and subsequent ecological disturbance events illustrate the complexity of problems in ecology and environmental science, and can be used as effective teaching tools. Unpacking the...
Leaf litter and soil invertebrates
05 Dec 2018 | Teaching Materials | Contributor(s):
By Tanya Matlaga1, Emily Mausteller2
1. Susquehanna University 2. Marshall University
The diversity of invertebrates occupying the leaf litter and organic layer of soil can be quantified to examine abiotic and biotic questions. This lab can be used as a starting point for a...
Bioinformatics - Investigating Sequence Similarity
04 Dec 2018 | Teaching Materials | Contributor(s):
By Adam Kleinschmit1, Benita Brink1, Steven Roof2, Carlos Christopher Goller3, Sabrina Robertson3
1. Adams State University 2. Fairmont State University 3. North Carolina State University
This laboratory module, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.
Complete Set of Lessons
01 Nov 2018 | Teaching Materials | Contributor(s):
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
The Genome Solver Project began as a way to teach faculty some basic skills in bioinformatics - no coding or scripting. These Lessons also work well in the undergraduate classroom, culminating with...
Lesson VI - The Community Science Project
31 Oct 2018 | Teaching Materials | Contributor(s):
Genome Solver's Community Science Project was developed as a way to use the skills taught in the previous lessons. We're asking members of the community to provide instances of potential phage...
Lesson V - Phylogenetics
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson V is an introduction to Phylogenetics.
Lesson IV - Comparative Genomics
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson IV, Comparative Genomics, discusses some of the tools...
Lesson III - Annotation
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all...
Lesson II - Databases
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson II introduces the principal databases for microbial...
Lesson I - Introduction to Genome Solver
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Part I is the Introduction to the Genome Solver Project.
DataONE Module 01: Why Data Management?
30 Oct 2018 | Teaching Materials | Contributor(s):
By Amber E Budden
Trends in data collection, storage and loss, the importance and benefits of data management, and an introduction to the data life cycle.
DataONE Module 03: Data Management Planning
Benefits of a data management plan (DMP), DMP components, tools for creating a DMP, NSF DMP information, and a sample DMP.
DataONE Module 02: Data Sharing
Data sharing in the context of the data life cycle, the value of sharing data, concerns about sharing data, and methods and best practices for sharing data.
Computational Biology using R
By Hong Qin
University of Tennessee Chattanooga
This is an introductory level course on computational biology.
Introduction to Mathematical Modeling in Biotechnology, Cell Biology, and Physiology
By Borbala Mazzag1, Kamila Larripa1
Humboldt State University
The course is a mathematical and computational exploration of five diverse areas of biology: human locomotion, gene sequence analysis, signal transduction pathways involved in cancer,...
By Richard FitzHugh1, Jin-ichi Nagumo2
1. Technische Hochschule 2. University of Tokyo
The FitzHugh–Nagumo model describes a prototype of an excitable system (e.g., a neuron).
Statistical Exploration of Climate Data
By Tamra Carpenter1, Jon Kettenring2, Robert Vanderbei3
1. DIMACS, Rutgers University 2. Research Institute for Scientists Emeriti, Drew University 3. Princeton University
In this module the students will learn some basic concepts in statistical thinking about data, with emphasis on exploratory data analysis.
Hawk vs. Dove Game
By Drew LaMar
College of William and Mary
Hawk vs. Dove Game is a model of conflict for two players in game theory.
29 Oct 2018 | Teaching Materials | Contributor(s):
By Divid Diez1, Chris Barr1, Mine Çetinkaya-Rundel2
1. OpenIntro 2. Duke University
OpenIntro was started with one goal in mind: create a free and open-source introductory textbook.
BIO103R: Bio 103 and 104 Labs in R at URI
By Rachel Schwartz1, Linda Forrester1
University of Rhode Island
GitHub repository for Bio 103 and 104 Labs in R at University of Rhode Island