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Tags: phylogenetics

All Categories (1-20 of 36)

  1. bridgette clarkston

    https://qubeshub.org/community/members/12616

  2. Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach

    29 May 2019 | Teaching Materials | Contributor(s):

    By Ami Erickson

    This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein...

    https://qubeshub.org/qubesresources/publications/1247/?v=1

  3. Sequence Similarity Resource Adaptation: Exploring Ebola Virus

    16 May 2019 | Teaching Materials | Contributor(s):

    By William Tapprich

    University of Nebraska-Omaha

    This adaptation of the sequence similarity resource provides biology students with a basic set of bioinformatics concepts and tools. These concepts and tools are used to explore relationships...

    https://qubeshub.org/qubesresources/publications/1219/?v=1

  4. Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses

    02 May 2019 | Teaching Materials | Contributor(s):

    By Adam Kleinschmit1, Benita Brink1, Steven Roof2, Carlos Christopher Goller3, Sabrina Robertson3

    1. Adams State University 2. Fairmont State University 3. North Carolina State University

    This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

    https://qubeshub.org/qubesresources/publications/56/?v=5

  5. Greta J Binford

    https://qubeshub.org/community/members/11176

  6. Bioinformatics - Investigating Sequence Similarity

    04 Dec 2018 | Teaching Materials | Contributor(s):

    By Adam Kleinschmit1, Benita Brink1, Steven Roof2, Carlos Christopher Goller3, Sabrina Robertson3

    1. Adams State University 2. Fairmont State University 3. North Carolina State University

    This laboratory module, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

    https://qubeshub.org/qubesresources/publications/56/?v=4

  7. Phylogeny.fr: Robust Phylogenetic Analysis For The Non-Specialist

    Collections | 06 Nov 2018 | Posted by Drew LaMar

    https://qubeshub.org/community/groups/birdd/collections/molecular-birdd-data

  8. Niema Moshiri

    https://qubeshub.org/community/members/9736

  9. The Evolution of Color Vision in Monkeys: From Nucleotides to Ecology

    23 Oct 2018 | Teaching Materials | Contributor(s):

    By Merle Heidemann1, Peter J.T. White1, Jim Smith1

    Michigan State University

    This case study examines the evolution color vision in Old World and New World monkeys from multiple biological perspectives.

    https://qubeshub.org/qubesresources/publications/843/?v=1

  10. Pablo Chialvo

    https://qubeshub.org/community/members/9214

  11. Lorena Ament-Velásquez

    https://qubeshub.org/community/members/7961

  12. Using DNA Subway to Analyze Sequence Relationships

    28 May 2018 | Teaching Materials | Contributor(s):

    By Jason Williams1, Ray A. Enke2, Oliver Hyman2, Emily Lescak3, Sam S Donovan4, William Tapprich5, Elizabeth F Ryder6

    1. DNA Learning Center 2. The Department of Biology, James Madison University; The Center for Genome & Metagenome Studies, James Madison University 3. University of Alaska 4. University of Pittsburgh 5. University of Nebraska-Omaha 6. Worcester Polytechnic Institute

    This is a bioinformatics exercise using the DNA Subway Blue Line, a user-friendly pipeline of bioinformatics tools, to analyze a collection of mosquito DNA bar-code sequences.

    https://qubeshub.org/qubesresources/publications/165/?v=2

  13. Intro to DNA Barcoding

    28 May 2018 | Teaching Materials | Contributor(s):

    By Oliver Hyman1, Andrea Pesce2, Elizabeth Doyle2, Ray A Enke1

    1. The Department of Biology, James Madison University; The Center for Genome & Metagenome Studies, James Madison University 2. James Madison University

    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 30-45 min lecture or lab class period.

    https://qubeshub.org/qubesresources/publications/600/?v=1

  14. Intro to DNA Subway Blue Line

    28 May 2018 | Teaching Materials | Contributor(s):

    By Oliver Hyman1, Andrea Pesce2, Elizabeth Doyle2, Ray A Enke1

    1. The Department of Biology, James Madison University; The Center for Genome & Metagenome Studies, James Madison University 2. James Madison University

    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 1 hr 50 min lecture or lab class period.

    https://qubeshub.org/qubesresources/publications/599/?v=1

  15. Fabien LAFUMA

    https://qubeshub.org/community/members/7656

  16. E. coli Citrate Use

    09 Feb 2018 | Teaching Materials | Contributor(s):

    By Peter White1, Alexa Warwick1, Louise Mead2, Merle Heidemann, Jim Smith1

    1. Michigan State University 2. BEACON Center for the Study of Evolution in Action

    EvoEd module on citrate use in E.coli

    https://qubeshub.org/qubesresources/publications/357/?v=1

  17. Monkey Opsins

    09 Feb 2018 | Teaching Materials | Contributor(s):

    By Peter White1, Alexa Warwick1, Louise Mead2, Merle Heidemann1, Jim Smith1

    1. Michigan State University 2. BEACON Center for the Study of Evolution in Action

    This case will examine the evolution of trichromatic vision in old world monkeys.

    https://qubeshub.org/qubesresources/publications/356/?v=1

  18. DNA Subway Learning Resources

    18 Oct 2017 | Teaching Materials | Contributor(s):

    By Jason Williams

    DNA Learning Center

    DNA Subway is a NIBLSE Recommended resource. This is a collection of learning resources associated with DNA Subway.

    https://qubeshub.org/qubesresources/publications/164/?v=2

  19. Using DNA Subway to Analyze Sequence Relationships

    18 Oct 2017 | Teaching Materials | Contributor(s):

    By Jason Williams

    DNA Learning Center

    This is a bioinformatics exercise using DNA Subway

    https://qubeshub.org/qubesresources/publications/165/?v=1

  20. DNA Subway Learning Resources

    16 Oct 2017 | Teaching Materials | Contributor(s):

    By Jason Williams

    Cold Spring Harbor Laboratory

    DNA Subway is a NIBLSE Recommended resource. This is a collection of learning resources associated with DNA Subway.

    https://qubeshub.org/qubesresources/publications/164/?v=1